3j7t
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Calcium atpase structure with two bound calcium ions determined by electron crystallography of thin 3D crystals== | ==Calcium atpase structure with two bound calcium ions determined by electron crystallography of thin 3D crystals== | ||
<StructureSection load='3j7t' size='340' side='right' caption='[[3j7t]], [[Resolution|resolution]] 3.40Å' scene=''> | <StructureSection load='3j7t' size='340' side='right' caption='[[3j7t]], [[Resolution|resolution]] 3.40Å' scene=''> | ||
| Line 6: | Line 7: | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1su4|1su4]], [[3j7u|3j7u]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1su4|1su4]], [[3j7u|3j7u]]</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Calcium-transporting_ATPase Calcium-transporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.8 3.6.3.8] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Calcium-transporting_ATPase Calcium-transporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.8 3.6.3.8] </span></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3j7t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j7t OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3j7t RCSB], [http://www.ebi.ac.uk/pdbsum/3j7t PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3j7t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j7t OCA], [http://pdbe.org/3j7t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3j7t RCSB], [http://www.ebi.ac.uk/pdbsum/3j7t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3j7t ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
[[http://www.uniprot.org/uniprot/AT2A1_RABIT AT2A1_RABIT]] This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction (By similarity). | [[http://www.uniprot.org/uniprot/AT2A1_RABIT AT2A1_RABIT]] This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction (By similarity). | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Membrane proteins and macromolecular complexes often yield crystals too small or too thin for even the modern synchrotron X-ray beam. Electron crystallography could provide a powerful means for structure determination with such undersized crystals, as protein atoms diffract electrons four to five orders of magnitude more strongly than they do X-rays. Furthermore, as electron crystallography yields Coulomb potential maps rather than electron density maps, it could provide a unique method to visualize the charged states of amino acid residues and metals. Here we describe an attempt to develop a methodology for electron crystallography of ultrathin (only a few layers thick) 3D protein crystals and present the Coulomb potential maps at 3.4-A and 3.2-A resolution, respectively, obtained from Ca(2+)-ATPase and catalase crystals. These maps demonstrate that it is indeed possible to build atomic models from such crystals and even to determine the charged states of amino acid residues in the Ca(2+)-binding sites of Ca(2+)-ATPase and that of the iron atom in the heme in catalase. | ||
| + | |||
| + | Electron crystallography of ultrathin 3D protein crystals: atomic model with charges.,Yonekura K, Kato K, Ogasawara M, Tomita M, Toyoshima C Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):3368-73. doi:, 10.1073/pnas.1500724112. Epub 2015 Feb 17. PMID:25730881<ref>PMID:25730881</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 3j7t" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
Revision as of 09:09, 3 October 2016
Calcium atpase structure with two bound calcium ions determined by electron crystallography of thin 3D crystals
| |||||||||||
