1p9k
From Proteopedia
| Line 7: | Line 7: | ||
|ACTIVITY= | |ACTIVITY= | ||
|GENE= ybcJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | |GENE= ybcJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1p9k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p9k OCA], [http://www.ebi.ac.uk/pdbsum/1p9k PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1p9k RCSB]</span> | ||
}} | }} | ||
| Line 40: | Line 43: | ||
[[Category: structural genomic]] | [[Category: structural genomic]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:56:47 2008'' |
Revision as of 19:56, 30 March 2008
| |||||||
| Gene: | ybcJ (Escherichia coli) | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
THE SOLUTION STRUCTURE OF YBCJ FROM E. COLI REVEALS A RECENTLY DISCOVERED ALFAL MOTIF INVOLVED IN RNA-BINDING
Overview
The structure of the recombinant Escherichia coli protein YbcJ, a representative of a conserved family of bacterial proteins (COG2501), was determined by nuclear magnetic resonance. The fold of YbcJ identified it as a member of the larger family of S4-like RNA binding domains. These domains bind to structured RNA, such as that found in tRNA, rRNA, and a pseudoknot of mRNA. The structure of YbcJ revealed a highly conserved patch of basic residues, comprising amino acids K26, K38, R55, K56, and K59, which likely participate in RNA binding.
About this Structure
1P9K is a Single protein structure of sequence from Escherichia coli. This structure supersedes the now removed PDB entry 1O09. Full crystallographic information is available from OCA.
Reference
The solution structure of YbcJ from Escherichia coli reveals a recently discovered alphaL motif involved in RNA binding., Volpon L, Lievre C, Osborne MJ, Gandhi S, Iannuzzi P, Larocque R, Cygler M, Gehring K, Ekiel I, J Bacteriol. 2003 Jul;185(14):4204-10. PMID:12837795
Page seeded by OCA on Sun Mar 30 22:56:47 2008
Categories: Escherichia coli | Single protein | BSGI, Montreal-Kingston Bacterial Structural Genomics Initiative. | Cygler, M. | Ekiel, I. | Gandhi, S. | Gehring, K. | Iannuzzi, P. | Larocque, R. | Lievre, C. | Matte, A. | Osborne, M J. | Volpon, L. | Alfal motif | Bsgi | E coli | Montreal-kingston bacterial structural genomics initiative | Rna-binding protein | Structural genomic
