Template:ConSurf
From Proteopedia
(Difference between revisions)
(creating a template that inserts ConSurf div) |
(creating a template that inserts ConSurf div - reverse order of parameters) |
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It '''cannot''' be used in the regular way, as <code><nowiki>{{ConSurf}}</nowiki></code> | It '''cannot''' be used in the regular way, as <code><nowiki>{{ConSurf}}</nowiki></code> | ||
| - | You must insert it as <code><nowiki>{{subst:ConSurf | + | You must insert it as <code><nowiki>{{subst:ConSurf|1stp|st}}</nowiki></code> |
Where the 2 parameters, <code>st</code> and <code>1stp</code>, need to be adjusted to your case: | Where the 2 parameters, <code>st</code> and <code>1stp</code>, need to be adjusted to your case: | ||
| - | * 1st parameter is the | + | * 1st parameter is the PDB ID of the model |
| - | * 2nd parameter is the | + | * 2nd parameter is the 2nd and 3rd characters of the ID |
The result will look like below and will be made a hard-coded content of the page (i.e. the template wikitext is removed and the result is inserted into the page source). | The result will look like below and will be made a hard-coded content of the page (i.e. the template wikitext is removed and the result is inserted into the page source). | ||
| - | |||
| - | <!--script /wiki/ConSurf/{{{1}}}/{{{2}}}_consurf.spt;--> | ||
</noinclude> | </noinclude> | ||
| Line 24: | Line 22: | ||
select protein; define ~consurf_to_do selected; | select protein; define ~consurf_to_do selected; | ||
consurf_initial_scene = true; | consurf_initial_scene = true; | ||
| - | script /wiki/ConSurf/ | + | script /wiki/ConSurf/{{{2}}}/{{{1}}}_consurf.spt; |
</scriptWhenChecked> | </scriptWhenChecked> | ||
<scriptWhenUnchecked> | <scriptWhenUnchecked> | ||
| Line 34: | Line 32: | ||
You may read the [[Conservation%2C_Evolutionary|explanation]] | You may read the [[Conservation%2C_Evolutionary|explanation]] | ||
of the method and the full data available from | of the method and the full data available from | ||
| - | [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID={{{ | + | [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID={{{1}}} ConSurf]. |
<!-- end of content inserted by the ConSurf template --> | <!-- end of content inserted by the ConSurf template --> | ||
Revision as of 07:49, 13 October 2016
HOW TO USE THIS TEMPLATE:
It cannot be used in the regular way, as {{ConSurf}}
You must insert it as {{subst:ConSurf|1stp|st}}
Where the 2 parameters, st and 1stp, need to be adjusted to your case:
- 1st parameter is the PDB ID of the model
- 2nd parameter is the 2nd and 3rd characters of the ID
The result will look like below and will be made a hard-coded content of the page (i.e. the template wikitext is removed and the result is inserted into the page source).
Evolutionary Conservation
Check , as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
