5e5d
From Proteopedia
(Difference between revisions)
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| - | '''Unreleased structure''' | ||
| - | + | ==Native structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv. oryzae== | |
| - | + | <StructureSection load='5e5d' size='340' side='right' caption='[[5e5d]], [[Resolution|resolution]] 2.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[5e5d]] is a 1 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3dld 3dld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E5D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5E5D FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr> | |
| - | [[Category: | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dld|3dld]]</td></tr> |
| - | [[Category: Kang, L | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptide_deformylase Peptide deformylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.88 3.5.1.88] </span></td></tr> |
| - | [[Category: Ngo, H | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5e5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e5d OCA], [http://pdbe.org/5e5d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5e5d RCSB], [http://www.ebi.ac.uk/pdbsum/5e5d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5e5d ProSAT]</span></td></tr> |
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/Q5H3Z2_XANOR Q5H3Z2_XANOR]] Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.[HAMAP-Rule:MF_00163] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Peptide deformylase]] | ||
| + | [[Category: Kang, L W]] | ||
| + | [[Category: Ngo, H P.T]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: Metal binding protein]] | ||
Revision as of 17:15, 19 October 2016
Native structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv. oryzae
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