1pl0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
|PDB= 1pl0 |SIZE=350|CAPTION= <scene name='initialview01'>1pl0</scene>, resolution 2.6&Aring;
|PDB= 1pl0 |SIZE=350|CAPTION= <scene name='initialview01'>1pl0</scene>, resolution 2.6&Aring;
|SITE=
|SITE=
-
|LIGAND= <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=AMZ:AMINOIMIDAZOLE+4-CARBOXAMIDE+RIBONUCLEOTIDE'>AMZ</scene>, <scene name='pdbligand=BW2:N-(4-{[(2-AMINO-4-OXO-3,4-DIHYDROQUINAZOLIN-6-YL)AMINO]SULFONYL}BENZOYL)GLUTAMIC+ACID'>BW2</scene> and <scene name='pdbligand=XMP:XANTHOSINE-5&#39;-MONOPHOSPHATE'>XMP</scene>
+
|LIGAND= <scene name='pdbligand=AMZ:AMINOIMIDAZOLE+4-CARBOXAMIDE+RIBONUCLEOTIDE'>AMZ</scene>, <scene name='pdbligand=BW2:N-(4-{[(2-AMINO-4-OXO-3,4-DIHYDROQUINAZOLIN-6-YL)AMINO]SULFONYL}BENZOYL)GLUTAMIC+ACID'>BW2</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=XMP:XANTHOSINE-5&#39;-MONOPHOSPHATE'>XMP</scene>
|ACTIVITY=
|ACTIVITY=
|GENE= ATIC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
|GENE= ATIC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
 +
|DOMAIN=
 +
|RELATEDENTRY=[[1p4r|1P4R]], [[1pkx|1PKX]]
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pl0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pl0 OCA], [http://www.ebi.ac.uk/pdbsum/1pl0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pl0 RCSB]</span>
}}
}}
Line 16: Line 19:
==Disease==
==Disease==
-
Known diseases associated with this structure: AICA-ribosiduria due to ATIC deficiency OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=601731 601731]]
+
Known disease associated with this structure: AICA-ribosiduria due to ATIC deficiency OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=601731 601731]]
==About this Structure==
==About this Structure==
Line 30: Line 33:
[[Category: Horton, P A.]]
[[Category: Horton, P A.]]
[[Category: Wilson, I A.]]
[[Category: Wilson, I A.]]
-
[[Category: AMZ]]
 
-
[[Category: BW2]]
 
-
[[Category: K]]
 
-
[[Category: XMP]]
 
[[Category: aicar]]
[[Category: aicar]]
[[Category: aicar transformylase]]
[[Category: aicar transformylase]]
Line 42: Line 41:
[[Category: xanthosine monophosphate]]
[[Category: xanthosine monophosphate]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 13:13:25 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:01:07 2008''

Revision as of 20:01, 30 March 2008


PDB ID 1pl0

Drag the structure with the mouse to rotate
, resolution 2.6Å
Ligands: , , ,
Gene: ATIC (Homo sapiens)
Related: 1P4R, 1PKX


Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Crystal structure of human ATIC in complex with folate-based inhibitor, BW2315U89UC


Contents

Overview

Aminoimidazole-4-carboxamide ribonucleotide (AICAR) transformylase/IMP cyclohydrolase (ATIC) is a bifunctional enzyme with folate-dependent AICAR transformylase and IMP cyclohydrolase activities that catalyzes the last two steps of purine biosynthesis. The AICAR transformylase inhibitors BW1540 and BW2315 are sulfamido-bridged 5,8-dideazafolate analogs with remarkably potent K(i) values of 8 and 6 nm, respectively, compared with most other antifolates. Crystal structures of ATIC at 2.55 and 2.60 A with each inhibitor, in the presence of substrate AICAR, revealed that the sulfonyl groups dominate inhibitor binding and orientation through interaction with the proposed oxyanion hole. These agents then appear to mimic the anionic transition state and now implicate Asn(431') in the reaction mechanism along with previously identified key catalytic residues Lys(266) and His(267). Potent and selective inhibition of the AICAR transformylase active site, compared with other folate-dependent enzymes, should therefore be pursued by further design of sulfonyl-containing antifolates.

Disease

Known disease associated with this structure: AICA-ribosiduria due to ATIC deficiency OMIM:[601731]

About this Structure

1PL0 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Crystal structures of human bifunctional enzyme aminoimidazole-4-carboxamide ribonucleotide transformylase/IMP cyclohydrolase in complex with potent sulfonyl-containing antifolates., Cheong CG, Wolan DW, Greasley SE, Horton PA, Beardsley GP, Wilson IA, J Biol Chem. 2004 Apr 23;279(17):18034-45. Epub 2004 Feb 13. PMID:14966129

Page seeded by OCA on Sun Mar 30 23:01:07 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools