Ubiquitin conjugating enzyme
From Proteopedia
(Difference between revisions)
| Line 31: | Line 31: | ||
**[[2aak]] – AtUbc <BR /> | **[[2aak]] – AtUbc <BR /> | ||
**[[1z3d]] – CeUbc <BR /> | **[[1z3d]] – CeUbc <BR /> | ||
| + | **[[3we5]] – Ubc – poplar mushroom<BR /> | ||
*Ubiquitin conjugating enzyme 2 | *Ubiquitin conjugating enzyme 2 | ||
| Line 36: | Line 37: | ||
**[[1ayz]] – yUbc <BR /> | **[[1ayz]] – yUbc <BR /> | ||
**[[1z2u]] – CeUbc <BR /> | **[[1z2u]] – CeUbc <BR /> | ||
| + | **[[4r62]] – yUbc + ubiquitin carboxyl extension protein 80 <BR /> | ||
*Ubiquitin conjugating enzyme 4 | *Ubiquitin conjugating enzyme 4 | ||
| Line 41: | Line 43: | ||
**[[1qcq]] – yUbc <BR /> | **[[1qcq]] – yUbc <BR /> | ||
**[[4ii2]] – Ubc (mutant) + E1 + ATP – fission yeast<BR /> | **[[4ii2]] – Ubc (mutant) + E1 + ATP – fission yeast<BR /> | ||
| + | **[[5aie]] – yUbc + NOT4 RING domain <BR /> | ||
*Ubiquitin conjugating enzyme 5 | *Ubiquitin conjugating enzyme 5 | ||
| Line 69: | Line 72: | ||
**[[4jjq]] – hUbc + ubiquitin carboxyl terminal hydrolase <BR /> | **[[4jjq]] – hUbc + ubiquitin carboxyl terminal hydrolase <BR /> | ||
| - | *Ubiquitin conjugating enzyme 7 | + | *Ubiquitin conjugating enzyme 7 or Ubc L3 |
**[[2ucz]] – yUbc <BR /> | **[[2ucz]] – yUbc <BR /> | ||
| Line 78: | Line 81: | ||
**[[3sqv]] – hUbc + secreted effector protein <BR /> | **[[3sqv]] – hUbc + secreted effector protein <BR /> | ||
**[[3sy2]] – hUbc + E3 Sopa <BR /> | **[[3sy2]] – hUbc + E3 Sopa <BR /> | ||
| + | **[[4q5e]], [[4q5h]] – hUbc (mutant) + ubiquitin + OspG<BR /> | ||
| + | **[[5hpt]] – hUbc + ubiquitin + NEDD4-like E3 ubiquitin-protein<BR /> | ||
*Ubiquitin conjugating enzyme 8 | *Ubiquitin conjugating enzyme 8 | ||
**[[1y6l]], [[1wzw]], [[1wzv]] – hUbc <BR /> | **[[1y6l]], [[1wzw]], [[1wzv]] – hUbc <BR /> | ||
| - | **[[2kjh]] – hUbc + | + | **[[2kjh]] – hUbc + ubiquitin <BR /> |
| + | **[[4x57]] – AtUbc + membrane-anchord ubiquitin-fold protein <BR /> | ||
*Ubiquitin conjugating enzyme 9 see [[SUMO conjugating enzyme Ubc9]] | *Ubiquitin conjugating enzyme 9 see [[SUMO conjugating enzyme Ubc9]] | ||
| - | *Ubiquitin conjugating enzyme 10 | + | *Ubiquitin conjugating enzyme 10 or Ubc C |
**[[1i7k]] – hUbc (mutant) <BR /> | **[[1i7k]] – hUbc (mutant) <BR /> | ||
| + | **[[4yii]] – hUbc + anaphase-promoting complex subunit 2<BR /> | ||
*Ubiquitin conjugating enzyme 12 (NEDD8 conjugating enzyme; Ubc F) | *Ubiquitin conjugating enzyme 12 (NEDD8 conjugating enzyme; Ubc F) | ||
| Line 101: | Line 108: | ||
**[[3tdi]] – hUbc + defective in cullin neddylation protein <BR /> | **[[3tdi]] – hUbc + defective in cullin neddylation protein <BR /> | ||
| - | *Ubiquitin conjugating enzyme 13 | + | *Ubiquitin conjugating enzyme 13 or Ubc N |
**[[1jbb]] – yUbc <BR /> | **[[1jbb]] – yUbc <BR /> | ||
| Line 107: | Line 114: | ||
**[[1j74]] – hMms2 <BR /> | **[[1j74]] – hMms2 <BR /> | ||
**[[1j7d]] – hUbc/Mms2 <BR /> | **[[1j7d]] – hUbc/Mms2 <BR /> | ||
| + | **[[4onl]], [[4onm]], [[4onn]] – hUbc + Mms2 (mutant) <BR /> | ||
| + | **[[4nr3]], [[4nrg]], [[4nri]] – hUbc (mutant) + Mms2 <BR /> | ||
**[[4fh1]] – hUbc (mutant) <BR /> | **[[4fh1]] – hUbc (mutant) <BR /> | ||
| Line 118: | Line 127: | ||
**[[3von]] – hUbc/Mms2 + OTUB1 <BR /> | **[[3von]] – hUbc/Mms2 + OTUB1 <BR /> | ||
**[[1zgu]] – hMms2 + ubiquitin - NMR <BR /> | **[[1zgu]] – hMms2 + ubiquitin - NMR <BR /> | ||
| + | **[[5eya]] – hUbc + ubiquitin + TRIM25 ring domain<BR /> | ||
| + | **[[4tkp]] – hUbc + TRIM5 ring domain<BR /> | ||
**[[2gmi]] – hUbc/Mms2 (mutant) + ubiquitin <BR /> | **[[2gmi]] – hUbc/Mms2 (mutant) + ubiquitin <BR /> | ||
| + | **[[4dhj]] – hUbc + ubiquitin + OTUB1<BR /> | ||
| + | **[[4whv]] – hUbc + ubiquitin + E3 ubiquitin-protein ligase RNF8<BR /> | ||
| + | **[[5ait]], [[5aiu]] – hUbc + ubiquitin + E3 ubiquitin-protein ligase RNF4<BR /> | ||
| + | **[[4orh]] – hUbc/Mms2 + E3 ubiquitin-protein ligase RN8<BR /> | ||
**[[4ip3]], [[3w31]] – hUbc + Orf169b <BR /> | **[[4ip3]], [[3w31]] – hUbc + Orf169b <BR /> | ||
**[[2oxq]] – Ubc + CHIP U-box - zebrafish<BR /> | **[[2oxq]] – Ubc + CHIP U-box - zebrafish<BR /> | ||
| + | |||
| + | *Ubc16 or Ubc W | ||
| + | |||
| + | **[[2mt6]] – hUbc - NMR <BR /> | ||
*Ubiquitin conjugating enzyme B | *Ubiquitin conjugating enzyme B | ||
| Line 131: | Line 150: | ||
**[[2yho]] – hUbc D1 + E3 Mylip <BR /> | **[[2yho]] – hUbc D1 + E3 Mylip <BR /> | ||
| + | **[[5fer]] – hUbc D1 + ubiquitin carboxyl extension protein 80 + TRIM25 ring <BR /> | ||
| + | **[[4qpl]] – hUbc D1 + E3 ubiquitin-protein ligase RNF146<BR /> | ||
**[[4ldt]] – hUbc D2 + OTUB1 + ubiquitin <BR /> | **[[4ldt]] – hUbc D2 + OTUB1 + ubiquitin <BR /> | ||
| + | **[[5d1k]], [[5d1l]], [[5d1m]] – hUbc D2 + E3 ubiquitin-protein ligase RNF25<BR /> | ||
| + | **[[5edv]] – hUbc D2 + ubiquitin + E3 ubiquitin-protein ligase RNF31<BR /> | ||
| + | **[[4v3k]], [[4v3l]] – hUbc D2 + ubiquitin + E3 ubiquitin-protein ligase RNF38<BR /> | ||
| + | **[[5d0k]], [[5d0m]] – hUbc D2 + ubiquitin + RING finger protein 165<BR /> | ||
| + | **[[4wz3]] – hUbc D2 + E3 ubiquitin-protein ligase LubX<BR /> | ||
| + | **[[5egg]] – hUbc D3 <BR /> | ||
| + | **[[5ifr]] – hUbc D3 + ubiquitin <BR /> | ||
| + | **[[4s3o]] – hUbc D3 + polycomb group ring finger protein + E3 ubiquitin-protein ligase RING2<BR /> | ||
**[[4bvu]] – hUbc D3 + OspG + ubiquitin <BR /> | **[[4bvu]] – hUbc D3 + OspG + ubiquitin <BR /> | ||
| Line 153: | Line 182: | ||
**[[2f4w]] – hUbc <BR /> | **[[2f4w]] – hUbc <BR /> | ||
| - | * | + | *Ubc K |
| - | **[[ | + | **[[5dfl]] – hUbc + ubiquitin <BR /> |
*Ubiquitin conjugating enzyme Q | *Ubiquitin conjugating enzyme Q | ||
| Line 169: | Line 198: | ||
**[[1zdn]] – hUbc <BR /> | **[[1zdn]] – hUbc <BR /> | ||
| + | **[[5bnb]] – hUbc + ubiquitin <BR /> | ||
*Ubiquitin conjugating enzyme T | *Ubiquitin conjugating enzyme T | ||
| Line 179: | Line 209: | ||
**[[2hlw]] – hUbc catalytic domain - NMR<BR /> | **[[2hlw]] – hUbc catalytic domain - NMR<BR /> | ||
**[[3e95]] – PfUbc + ubiquitin carrier protein <BR /> | **[[3e95]] – PfUbc + ubiquitin carrier protein <BR /> | ||
| + | |||
| + | *Ubc Z | ||
| + | |||
| + | **[[5a4p]] – hUbc <BR /> | ||
*Ubiquitin conjugating enzyme E2-25KDa (Huntington interacting protein 2 HIP-2) | *Ubiquitin conjugating enzyme E2-25KDa (Huntington interacting protein 2 HIP-2) | ||
Revision as of 09:57, 1 December 2016
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3D Structures of ubiquitin conjugating enzyme
Updated on 01-December-2016
References
- ↑ Markson G, Kiel C, Hyde R, Brown S, Charalabous P, Bremm A, Semple J, Woodsmith J, Duley S, Salehi-Ashtiani K, Vidal M, Komander D, Serrano L, Lehner P, Sanderson CM. Analysis of the human E2 ubiquitin conjugating enzyme protein interaction network. Genome Res. 2009 Oct;19(10):1905-11. Epub 2009 Jun 23. PMID:19549727 doi:http://dx.doi.org/gr.093963.109
- ↑ Bosanac I, Phu L, Pan B, Zilberleyb I, Maurer B, Dixit VM, Hymowitz SG, Kirkpatrick DS. Modulation of K11-Linkage Formation by Variable Loop Residues within UbcH5A. J Mol Biol. 2011 May 6;408(3):420-31. Epub 2011 Mar 10. PMID:21396940 doi:10.1016/j.jmb.2011.03.011
