1qg9
From Proteopedia
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| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qg9 OCA], [http://www.ebi.ac.uk/pdbsum/1qg9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1qg9 RCSB]</span> | ||
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[[Category: transmembrane sodium channel]] | [[Category: transmembrane sodium channel]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:13:05 2008'' |
Revision as of 20:13, 30 March 2008
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
SECOND REPEAT (IS2MIC) FROM VOLTAGE-GATED SODIUM CHANNEL
Overview
Peptides representing transmembrane regions of the alpha-subunit of the voltage-gated sodium channel were synthesised and their structures analysed, using 1H NMR and CD, in trifluoroethanol and in dodecylphosphocholine micelles. Sequence analysis suggests that the channel has six regions, S1 to S6, predicted to span the membrane in four homologous domains, designated, I, II, III and IV. Presented here are studies of representatives examples of possible single spanning segments (IS2, IS4, IVS4) and a double spanning segment, IS34, composed of segments IS3 and IS4. In addition, we investigated ISlink56, the putative linker region between segments IS5 and IS6. All of the peptides were found to have predominantly alpha-helical structures in both solvent systems. There was some evidence for bending of the longer helices but there was no discernible evidence for well-defined tertiary structure.
About this Structure
1QG9 is a Single protein structure of sequence from [1]. Full crystallographic information is available from OCA.
Reference
Structural studies of synthetic peptides dissected from the voltage-gated sodium channel., Doak DG, Mulvey D, Kawaguchi K, Villalain J, Campbell ID, J Mol Biol. 1996 May 17;258(4):672-87. PMID:8637001
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