1qlb
From Proteopedia
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|PDB= 1qlb |SIZE=350|CAPTION= <scene name='initialview01'>1qlb</scene>, resolution 2.33Å | |PDB= 1qlb |SIZE=350|CAPTION= <scene name='initialview01'>1qlb</scene>, resolution 2.33Å | ||
|SITE= <scene name='pdbsite=FA1:Fad+Covalent+Bond+To+Protein+For+Chain+A'>FA1</scene>, <scene name='pdbsite=FA2:Fad+Covalent+Bond+To+Protein+For+Chain+D'>FA2</scene>, <scene name='pdbsite=FS1:Fe4s4+Fe+Sulphur+Centre+Ligands+For+Chain+B'>FS1</scene>, <scene name='pdbsite=FS2:Fe4s4+Fe+Sulphur+Centre+Ligands+For+Chain+E'>FS2</scene>, <scene name='pdbsite=FS3:Fe2s2+Fe+Sulphur+Centre+Ligands+For+Chain+B'>FS3</scene>, <scene name='pdbsite=FS4:Fe2s2+Fe+Sulphur+Centre+Ligands+For+Chain+E'>FS4</scene>, <scene name='pdbsite=FS5:Fe3s4+Fe+Sulphur+Centre+Ligands+For+Chain+B'>FS5</scene>, <scene name='pdbsite=FS6:Fe3s4+Fe+Sulphur+Centre+Ligands+For+Chain+E'>FS6</scene>, <scene name='pdbsite=HE1:Haem+Axial+Ligands+For+Chain+C'>HE1</scene> and <scene name='pdbsite=HE2:Haem+Axial+Ligands+For+Chain+F'>HE2</scene> | |SITE= <scene name='pdbsite=FA1:Fad+Covalent+Bond+To+Protein+For+Chain+A'>FA1</scene>, <scene name='pdbsite=FA2:Fad+Covalent+Bond+To+Protein+For+Chain+D'>FA2</scene>, <scene name='pdbsite=FS1:Fe4s4+Fe+Sulphur+Centre+Ligands+For+Chain+B'>FS1</scene>, <scene name='pdbsite=FS2:Fe4s4+Fe+Sulphur+Centre+Ligands+For+Chain+E'>FS2</scene>, <scene name='pdbsite=FS3:Fe2s2+Fe+Sulphur+Centre+Ligands+For+Chain+B'>FS3</scene>, <scene name='pdbsite=FS4:Fe2s2+Fe+Sulphur+Centre+Ligands+For+Chain+E'>FS4</scene>, <scene name='pdbsite=FS5:Fe3s4+Fe+Sulphur+Centre+Ligands+For+Chain+B'>FS5</scene>, <scene name='pdbsite=FS6:Fe3s4+Fe+Sulphur+Centre+Ligands+For+Chain+E'>FS6</scene>, <scene name='pdbsite=HE1:Haem+Axial+Ligands+For+Chain+C'>HE1</scene> and <scene name='pdbsite=HE2:Haem+Axial+Ligands+For+Chain+F'>HE2</scene> | ||
| - | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=FMR:FUMARATE'>FMR</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=LMT:DODECYL-BETA-D-MALTOSIDE'>LMT</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Succinate_dehydrogenase Succinate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.99.1 1.3.99.1] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Succinate_dehydrogenase Succinate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.99.1 1.3.99.1] </span> |
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qlb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qlb OCA], [http://www.ebi.ac.uk/pdbsum/1qlb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1qlb RCSB]</span> | ||
}} | }} | ||
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[[Category: Lancaster, C R.D.]] | [[Category: Lancaster, C R.D.]] | ||
[[Category: Michel, H.]] | [[Category: Michel, H.]] | ||
| - | [[Category: CA]] | ||
| - | [[Category: F3S]] | ||
| - | [[Category: FAD]] | ||
| - | [[Category: FES]] | ||
| - | [[Category: FMR]] | ||
| - | [[Category: HEM]] | ||
| - | [[Category: LMT]] | ||
| - | [[Category: SF4]] | ||
[[Category: citric acid cycle]] | [[Category: citric acid cycle]] | ||
[[Category: dihaem cytochrome b]] | [[Category: dihaem cytochrome b]] | ||
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[[Category: succinate dehydrogenase]] | [[Category: succinate dehydrogenase]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:15:20 2008'' |
Revision as of 20:15, 30 March 2008
| |||||||
| , resolution 2.33Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | , , , , , , , , and | ||||||
| Ligands: | , , , , , , , | ||||||
| Activity: | Succinate dehydrogenase, with EC number 1.3.99.1 | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
RESPIRATORY COMPLEX II-LIKE FUMARATE REDUCTASE FROM WOLINELLA SUCCINOGENES
Overview
Fumarate reductase couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, in a reaction opposite to that catalysed by the related complex II of the respiratory chain (succinate dehydrogenase). Here we describe the crystal structure at 2.2 A resolution of the three protein subunits containing fumarate reductase from the anaerobic bacterium Wolinella succinogenes. Subunit A contains the site of fumarate reduction and a covalently bound flavin adenine dinucleotide prosthetic group. Subunit B contains three iron-sulphur centres. The menaquinol-oxidizing subunit C consists of five membrane-spanning, primarily helical segments and binds two haem b molecules. On the basis of the structure, we propose a pathway of electron transfer from the dihaem cytochrome b to the site of fumarate reduction and a mechanism of fumarate reduction. The relative orientations of the soluble and membrane-embedded subunits of succinate:quinone oxidoreductases appear to be unique.
About this Structure
1QLB is a Protein complex structure of sequences from Wolinella succinogenes. Full crystallographic information is available from OCA.
Reference
Structure of fumarate reductase from Wolinella succinogenes at 2.2 A resolution., Lancaster CR, Kroger A, Auer M, Michel H, Nature. 1999 Nov 25;402(6760):377-85. PMID:10586875
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