3qoy
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of ribosomal protein L1 from Aquifex aeolicus== | ==Crystal structure of ribosomal protein L1 from Aquifex aeolicus== | ||
<StructureSection load='3qoy' size='340' side='right' caption='[[3qoy]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='3qoy' size='340' side='right' caption='[[3qoy]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3qoy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3qoy]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"aquifex_aeolicus"_huber_and_stetter_2001 "aquifex aeolicus" huber and stetter 2001]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QOY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QOY FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ad2|1ad2]], [[1cjs|1cjs]], [[1zho|1zho]], [[1mzp|1mzp]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ad2|1ad2]], [[1cjs|1cjs]], [[1zho|1zho]], [[1mzp|1mzp]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aq_1935, rplA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aq_1935, rplA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 "Aquifex aeolicus" Huber and Stetter 2001])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qoy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qoy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qoy RCSB], [http://www.ebi.ac.uk/pdbsum/3qoy PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qoy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qoy OCA], [http://pdbe.org/3qoy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3qoy RCSB], [http://www.ebi.ac.uk/pdbsum/3qoy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3qoy ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/RL1_AQUAE RL1_AQUAE]] Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.[HAMAP-Rule:MF_01318] Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA.[HAMAP-Rule:MF_01318] | ||
==See Also== | ==See Also== | ||
| Line 13: | Line 16: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Aquifex aeolicus]] | + | [[Category: Aquifex aeolicus huber and stetter 2001]] |
[[Category: Gabdulkhakov, A G]] | [[Category: Gabdulkhakov, A G]] | ||
[[Category: Garber, M B]] | [[Category: Garber, M B]] | ||
Revision as of 11:18, 10 December 2016
Crystal structure of ribosomal protein L1 from Aquifex aeolicus
| |||||||||||
Categories: Aquifex aeolicus huber and stetter 2001 | Gabdulkhakov, A G | Garber, M B | Nevskaya, N A | Nikonov, S V | Nikonova, E U | Shkliaeva, A A | Tishchenko, S V | Beta-alpha-beta | Mrna | Regulation of translation | Ribosomal protein | Ribosomal rna | Rrna binding | Structural constituent of ribosome | Translation
