5tp9

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m (Protected "5tp9" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 5tp9 is ON HOLD
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==Structure of the human GluN1/GluN2A LBD in complex with compound 2 (GNE9178)==
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<StructureSection load='5tp9' size='340' side='right' caption='[[5tp9]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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Authors: Wallweber, H.J.A., Lupardus, P.J.
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5tp9]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TP9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TP9 FirstGlance]. <br>
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Description: Structure of the human GluN1/GluN2A LBD in complex with compound 2 (GNE9178)
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=7H0:7-{[5-CHLORO-3-(TRIFLUOROMETHYL)-1H-PYRAZOL-1-YL]METHYL}-N-ETHYL-2-METHYL-5-OXO-5H-[1,3]THIAZOLO[3,2-A]PYRIMIDINE-3-CARBOXAMIDE'>7H0</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GLU:GLUTAMIC+ACID'>GLU</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene></td></tr>
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[[Category: Unreleased Structures]]
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5tpa|5tpa]]</td></tr>
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[[Category: Wallweber, H.J.A]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tp9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tp9 OCA], [http://pdbe.org/5tp9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tp9 RCSB], [http://www.ebi.ac.uk/pdbsum/5tp9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tp9 ProSAT]</span></td></tr>
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[[Category: Lupardus, P.J]]
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</table>
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== Disease ==
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[[http://www.uniprot.org/uniprot/NMDE1_HUMAN NMDE1_HUMAN]] Landau-Kleffner syndrome;Early-onset epileptic encephalopathy and intellectual disability due to GRIN2A mutation;Continuous spikes and waves during sleep;Rolandic epilepsy;Rolandic epilepsy - speech dyspraxia. The disease is caused by mutations affecting the gene represented in this entry. A chromosomal aberration involving GRIN2A has been found in a family with epilepsy and neurodevelopmental defects. Translocation t(16;17)(p13.2;q11.2). GRIN2A somatic mutations have been frequently found in cutaneous malignant melanoma, suggesting that the glutamate signaling pathway may play a role in the pathogenesis of melanoma.<ref>PMID:21499247</ref> <ref>PMID:24455489</ref> [[http://www.uniprot.org/uniprot/NMDZ1_HUMAN NMDZ1_HUMAN]] Defects in GRIN1 are the cause of mental retardation autosomal dominant type 8 (MRD8) [MIM:[http://omim.org/entry/614254 614254]]. Mental retardation is characterized by significantly below average general intellectual functioning associated with impairments in adaptative behavior and manifested during the developmental period.<ref>PMID:21376300</ref>
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== Function ==
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[[http://www.uniprot.org/uniprot/NMDE1_HUMAN NMDE1_HUMAN]] NMDA receptor subtype of glutamate-gated ion channels possesses high calcium permeability and voltage-dependent sensitivity to magnesium. Activation requires binding of agonist to both types of subunits. [[http://www.uniprot.org/uniprot/NMDZ1_HUMAN NMDZ1_HUMAN]] NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors (By similarity).
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Lupardus, P J]]
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[[Category: Wallweber, H J.A]]
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[[Category: Calcium channel]]
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[[Category: Glutamate]]
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[[Category: Glycine]]
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[[Category: Membrane]]
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[[Category: Nmda receptor]]
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[[Category: Transport protein]]

Revision as of 18:38, 10 December 2016

Structure of the human GluN1/GluN2A LBD in complex with compound 2 (GNE9178)

5tp9, resolution 2.40Å

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