User:Charli Barbet/Sandbox

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 42: Line 42:
As an example, the phosphorylated residues of [http://www.uniprot.org/uniprot/O43561 LAT] can bind the SH2 domain of Grb2 while the formation of this complex recruits on the SH3 domains of Grb2 some proteins of the [https://en.wikipedia.org/wiki/Vav_(protein) VAV family]. [http://www.uniprot.org/uniprot/P15498 '''VAV proteins] are guanine nucleotide exchange factors''' ([https://en.wikipedia.org/wiki/Guanine_nucleotide_exchange_factor GEF]) for the [https://en.wikipedia.org/wiki/GTPase GTPase proteins] of the [https://en.wikipedia.org/wiki/Rho_family_of_GTPases Rho family]. This complex has for main aim to introduce a Calcium flux and activate [https://en.wikipedia.org/wiki/Mitogen-activated_protein_kinase MAP kinase] allowing [https://en.wikipedia.org/wiki/T_cell T lymphocyte] proliferation.<ref> PMID 15886116</ref>
As an example, the phosphorylated residues of [http://www.uniprot.org/uniprot/O43561 LAT] can bind the SH2 domain of Grb2 while the formation of this complex recruits on the SH3 domains of Grb2 some proteins of the [https://en.wikipedia.org/wiki/Vav_(protein) VAV family]. [http://www.uniprot.org/uniprot/P15498 '''VAV proteins] are guanine nucleotide exchange factors''' ([https://en.wikipedia.org/wiki/Guanine_nucleotide_exchange_factor GEF]) for the [https://en.wikipedia.org/wiki/GTPase GTPase proteins] of the [https://en.wikipedia.org/wiki/Rho_family_of_GTPases Rho family]. This complex has for main aim to introduce a Calcium flux and activate [https://en.wikipedia.org/wiki/Mitogen-activated_protein_kinase MAP kinase] allowing [https://en.wikipedia.org/wiki/T_cell T lymphocyte] proliferation.<ref> PMID 15886116</ref>
-
Finally, it was proven that Grb2 plays a role in t'''he negative regulation of''' [http://www.uniprot.org/uniprot/P00533''' EGFR]'''. Indeed, [http://www.uniprot.org/uniprot/P22681 c-Cbl] is a protein implicated in the [http://www.uniprot.org/uniprot/O60260 E3] complex of [http://www.uniprot.org/uniprot/P00533 EGFR] ubiquitination, hence also its degradation [http://www.uniprot.org/uniprot/P22681 C-Cbl] thanks to its SH2 domain can directly bind to [http://www.uniprot.org/uniprot/P00533 EGFR] causing its degradation (Grb2 independent regulation). Yet [http://www.uniprot.org/uniprot/P22681 c-Cbl] can also indirectly bind to [http://www.uniprot.org/uniprot/P00533 EGFR] via its SH3 domain recognition by Grb2 (Dependant Grb2 regulation). The direct or indirect binding of [http://www.uniprot.org/uniprot/P22681 c-Cbl] on [http://www.uniprot.org/uniprot/P00533 EGFR] induce the recruitment of enzymes that are necessary for the ubiquitination of [http://www.uniprot.org/uniprot/P00533 EGFR]. Ubiquitination being a signal for protein degradation. It is important to note that negative regulation is more important when Grb2 is implicated and bound to [http://www.uniprot.org/uniprot/P22681 c-Cbl] rather than when [http://www.uniprot.org/uniprot/P22681 c-Cbl] is the only protein involved. <ref>PMID 10531381</ref> <ref> PMID 11823423</ref>
+
Finally, it was proven that Grb2 plays a role in '''the negative regulation of''' [http://www.uniprot.org/uniprot/P00533''' EGFR]'''. Indeed, [http://www.uniprot.org/uniprot/P22681 c-Cbl] is a protein implicated in the [http://www.uniprot.org/uniprot/O60260 '''E3] complex of''' [http://www.uniprot.org/uniprot/P00533''' EGFR] ubiquitination'''.[http://www.uniprot.org/uniprot/P22681 C-Cbl] thanks to its SH2 domain can directly bind to [http://www.uniprot.org/uniprot/P00533 EGFR] causing its degradation (Grb2 independent regulation). Yet [http://www.uniprot.org/uniprot/P22681 c-Cbl] can also indirectly bind to [http://www.uniprot.org/uniprot/P00533 EGFR] via its SH3 domain recognition by Grb2 (dependant Grb2 regulation). The direct or indirect binding of [http://www.uniprot.org/uniprot/P22681 c-Cbl] on [http://www.uniprot.org/uniprot/P00533 EGFR] induces the recruitment of enzymes that are necessary for the ubiquitination of [http://www.uniprot.org/uniprot/P00533 EGFR]. Ubiquitination being a signal for protein degradation. It is important to note that n'''egative regulation is more important when Grb2 is implicated and bound to''' [http://www.uniprot.org/uniprot/P22681 '''c-Cbl] rather than when''' [http://www.uniprot.org/uniprot/P22681 '''c-Cbl] is the only protein involved'''. <ref>PMID 10531381</ref> <ref> PMID 11823423</ref>
Line 70: Line 70:
== EGFR interaction ==
== EGFR interaction ==
[[Image:EGFR Grb2.jpg|thumb|upright=4|[http://www.ebi.ac.uk/intact/interaction/EBI-7874813 source]]]
[[Image:EGFR Grb2.jpg|thumb|upright=4|[http://www.ebi.ac.uk/intact/interaction/EBI-7874813 source]]]
-
As stated earlier, Grb2 is made of an SH2 domain able to bind to [https://en.wikipedia.org/wiki/Receptor_tyrosine_kinase tyrosine kinase receptors]. Thus, Grb2 is able to bind to the activated form of the Epidermal Growth Factor Receptor ([http://www.uniprot.org/uniprot/P00533 EGFR]). [http://www.uniprot.org/uniprot/P00533 EGFR] activation mainly comes from the binding of a ligand. There is a wide range of ligands that are able to bind [http://www.uniprot.org/uniprot/P00533 EGFR], yet the majority of the ligands come from the [https://en.wikipedia.org/wiki/ErbB ErbB family]. The most known ligands are [http://www.uniprot.org/uniprot/P01137 TGF-β] and [http://www.uniprot.org/uniprot/P01133 EGF]. The binding of these latest induces [http://www.uniprot.org/uniprot/P00533 EGFR] dimerization. This dimerization activates the intracellular tyrosine kinase domain characterized by the autophosphorylation of tyrosines (Y992, Y1045, Y1068, Y1086 and Y1173). The activated form of [http://www.uniprot.org/uniprot/P00533 EGFR] then recruits Grb2. Indeed, the SH2 domain of Grb2 (from the 60th to the 152nd amino acid) binds the phosphorylated tyrosines of [http://www.uniprot.org/uniprot/P00533 EGFR] (Y1068 & Y1086). This interaction leads to the recruitment of [http://www.uniprot.org/uniprot/Q07889 SOS] (Son Of Sevenless) via the SH3 domain of Grb2. As this example demonstrates, Grb2 is an adapting protein able to conduct a signal between two different proteins via its different domains. [http://www.uniprot.org/uniprot/Q07889 SOS] is a [https://en.wikipedia.org/wiki/Guanine_nucleotide_exchange_factor GEF protein] activating [http://www.uniprot.org/uniprot/P01112 RAS] and therefore in turn the [https://en.wikipedia.org/wiki/MAPK/ERK_pathway MAPK pathway]. <ref>PMID: 16273093</ref>
+
As stated earlier, Grb2 is made of an SH2 domain able to bind to [https://en.wikipedia.org/wiki/Receptor_tyrosine_kinase tyrosine kinase receptors]. Thus, Grb2 is able to bind to the activated form of the Epidermal Growth Factor Receptor ([http://www.uniprot.org/uniprot/P00533 EGFR]). [http://www.uniprot.org/uniprot/P00533 EGFR] activation mainly comes from the binding of a ligand. There is a wide range of ligands that are able to bind [http://www.uniprot.org/uniprot/P00533 EGFR] yet, the majority of the ligands come from the [https://en.wikipedia.org/wiki/ErbB ErbB family]. The most known ligands are [http://www.uniprot.org/uniprot/P01137 '''TGF-β'''] and [http://www.uniprot.org/uniprot/P01133 '''EGF''']. The binding of these latest induces [http://www.uniprot.org/uniprot/P00533 EGFR] dimerization. This '''dimerization''' activates the intracellular tyrosine kinase domain characterized by the '''autophosphorylation of tyrosines (Y992, Y1045, Y1068, Y1086 and Y1173'''). The activated form of [http://www.uniprot.org/uniprot/P00533 EGFR] then recruits Grb2. Indeed, the SH2 domain of Grb2 (from the 60th to the 152nd amino acid) binds the phosphorylated tyrosines of [http://www.uniprot.org/uniprot/P00533 EGFR] (Y1068 & Y1086). This interaction recruits [http://www.uniprot.org/uniprot/Q07889 SOS] (Son Of Sevenless) via the SH3 domain of Grb2. [http://www.uniprot.org/uniprot/Q07889 SOS] is a [https://en.wikipedia.org/wiki/Guanine_nucleotide_exchange_factor GEF protein] activating [http://www.uniprot.org/uniprot/P01112 RAS] and therefore in turn the [https://en.wikipedia.org/wiki/MAPK/ERK_pathway MAPK pathway]. <ref>PMID: 16273093</ref>
 +
Therefore, as this example elegantely demonstrates, Grb2 is an '''adaptor protein''' able to conduct a signal between two different proteins via its different domains.
<br style="clear:both" />
<br style="clear:both" />

Revision as of 16:01, 15 January 2017

Grb2 (1gri)

Caption for this structure

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

Charli Barbet

Personal tools