This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5lnr
From Proteopedia
(Difference between revisions)
m (Protected "5lnr" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of Arabidopsis thaliana Pdx1-PLP complex== | |
| - | + | <StructureSection load='5lnr' size='340' side='right' caption='[[5lnr]], [[Resolution|resolution]] 1.61Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[5lnr]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LNR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LNR FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | |
| - | [[Category: | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyridoxal_5'-phosphate_synthase_(glutamine_hydrolyzing) Pyridoxal 5'-phosphate synthase (glutamine hydrolyzing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.6 4.3.3.6] </span></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lnr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lnr OCA], [http://pdbe.org/5lnr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lnr RCSB], [http://www.ebi.ac.uk/pdbsum/5lnr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lnr ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/PDX13_ARATH PDX13_ARATH]] Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by PDX2. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Also plays an indirect role in resistance to singlet oxygen-generating photosensitizers.<ref>PMID:16157873</ref> <ref>PMID:16236150</ref> <ref>PMID:17468224</ref> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Begley, T P]] | ||
| + | [[Category: Ealick, S E]] | ||
| + | [[Category: Evans, G]] | ||
| + | [[Category: Guedez, G]] | ||
| + | [[Category: Hanes, J W]] | ||
| + | [[Category: Rodrigues, M J]] | ||
| + | [[Category: Royant, A]] | ||
| + | [[Category: Sinning, I]] | ||
| + | [[Category: Strohmeier, M]] | ||
| + | [[Category: Tews, I]] | ||
| + | [[Category: Weber, S]] | ||
| + | [[Category: Windeisen, V]] | ||
| + | [[Category: Zhang, Y]] | ||
| + | [[Category: Beta/alpha barrel]] | ||
| + | [[Category: Glutamine amidotransferase]] | ||
| + | [[Category: Lyase]] | ||
| + | [[Category: Pyridoxal phosphate synthase]] | ||
| + | [[Category: Vitamin b6 biosythesis]] | ||
Revision as of 00:45, 19 January 2017
Crystal structure of Arabidopsis thaliana Pdx1-PLP complex
| |||||||||||
