5tit

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Current revision (01:41, 11 March 2017) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 5tit is ON HOLD until Oct 03 2018
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==Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase==
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<StructureSection load='5tit' size='340' side='right' caption='[[5tit]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
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Authors: Godoy, A.S., Lima, G.M.A., Oliveira, K.I.Z., Torres, N.U., Maluf, F.V., Guido, R.C.V., Oliva, G.
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5tit]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TIT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5TIT FirstGlance]. <br>
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Description: Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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[[Category: Unreleased Structures]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5tit FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tit OCA], [http://pdbe.org/5tit PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5tit RCSB], [http://www.ebi.ac.uk/pdbsum/5tit PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5tit ProSAT]</span></td></tr>
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[[Category: Maluf, F.V]]
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</table>
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[[Category: Oliveira, K.I.Z]]
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== Function ==
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[[Category: Godoy, A.S]]
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[[http://www.uniprot.org/uniprot/POLG_ZIKV POLG_ZIKV]] Protein C: Encapsulates the genomic RNA.[UniProtKB:P17763] prM: Acts as a chaperone for envelope protein E during intracellular virion assembly by masking and inactivating envelope protein E fusion peptide. prM is matured in the last step of virion assembly, presumably to avoid catastrophic activation of the viral fusion peptide induced by the acidic pH of the trans-Golgi network. After cleavage by host furin, the pr peptide is released in the extracellular medium and small envelope protein M and envelope protein E homodimers are dissociated.[UniProtKB:P17763] Envelope protein E: Binding to host cell surface receptor is followed by virus internalization through clathrin-mediated endocytosis. Envelope protein E is subsequently involved in membrane fusion between virion and host late endosomes. Synthesized as a homodimer with prM which acts as a chaperone for envelope protein E. After cleavage of prM, envelope protein E dissociate from small envelope protein M and homodimerizes.[UniProtKB:P17763] Non-structural protein 1: Involved in virus replication and regulation of the innate immune response.[UniProtKB:P17763] Non-structural protein 2A: May be involved viral RNA replication and capsid assembly.[UniProtKB:P09732] Non-structural protein 4A: Induces host endoplasmic reticulum membrane rearrangements leading to the formation of virus-induced membranous vesicles hosting the dsRNA and polymerase, functioning as a replication complex. NS4A might also regulate the ATPase activity of the helicase region of Serine protease NS3 chain.[UniProtKB:P17763] Peptide 2k: Functions as a signal peptide for NS4B and is required for the interferon antagonism activity of the latter.[UniProtKB:P17763] Non-structural protein 4B: Inhibits interferon (IFN)-induced host STAT1 phosphorylation and nuclear translocation, thereby preventing the establishment of cellular antiviral state by blocking the IFN-alpha/beta pathway.[UniProtKB:P17763]
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[[Category: Guido, R.C.V]]
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__TOC__
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[[Category: Lima, G.M.A]]
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</StructureSection>
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[[Category: Godoy, A S]]
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[[Category: Guido, R C.V]]
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[[Category: Lima, G M.A]]
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[[Category: Maluf, F V]]
[[Category: Oliva, G]]
[[Category: Oliva, G]]
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[[Category: Torres, N.U]]
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[[Category: Oliveira, K I.Z]]
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[[Category: Torres, N U]]
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[[Category: Drug]]
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[[Category: Ns5]]
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[[Category: Polymerase]]
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[[Category: Rna]]
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[[Category: Viral protein]]
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[[Category: Virus]]
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[[Category: Zika]]

Current revision

Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase

5tit, resolution 2.31Å

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