Chemotaxis protein
From Proteopedia
(Difference between revisions)
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**[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]], [[6chy]], [[5chy]] – EcCheY (mutant) – ''Escherichia coli''<BR /> | **[[1ab6]], [[1d4z]], [[1e6m]], [[1e6k]], [[1e6l]], [[1jbe]], [[1mih]], [[3oo0]], [[3oo1]], [[6chy]], [[5chy]] – EcCheY (mutant) – ''Escherichia coli''<BR /> | ||
**[[1tmy]], [[2tmy]], [[3tmy]], [[4tmy]] - TmCheY – ''Thermotoga maritima''<br /> | **[[1tmy]], [[2tmy]], [[3tmy]], [[4tmy]] - TmCheY – ''Thermotoga maritima''<br /> | ||
| + | **[[4qyw]] - TmCheY (mutant) <br /> | ||
**[[4h60]], [[4hnr]], [[4jp1]] – VcCheY – ''Vibrio cholerae''<br /> | **[[4h60]], [[4hnr]], [[4jp1]] – VcCheY – ''Vibrio cholerae''<br /> | ||
**[[4hnq]] - VcCheY (mutant) <br /> | **[[4hnq]] - VcCheY (mutant) <br /> | ||
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**[[1djm]] – EcCheY – NMR<BR /> | **[[1djm]] – EcCheY – NMR<BR /> | ||
**[[2chy]] – StCheY - ''Salmonella typhimurium'' <br /> | **[[2chy]] – StCheY - ''Salmonella typhimurium'' <br /> | ||
| + | **[[5hm6]] – CheY – ''Acinetobacter baumannii'' <br /> | ||
*''CheY complexes'' | *''CheY complexes'' | ||
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**[[1fqw]] - EcCheY + BeF3 + Mn<br /> | **[[1fqw]] - EcCheY + BeF3 + Mn<br /> | ||
**[[3rvj]], [[3rvk]], [[3rvl]], [[3rvm]], [[3rvn]], [[3rvo]], [[3rvp]], [[3rvq]], [[3rvr]], [[3rvs]] - EcCheY (mutant) + BeF3 + Mn<br /> | **[[3rvj]], [[3rvk]], [[3rvl]], [[3rvm]], [[3rvn]], [[3rvo]], [[3rvp]], [[3rvq]], [[3rvr]], [[3rvs]] - EcCheY (mutant) + BeF3 + Mn<br /> | ||
| + | **[[5d2c]], [[5dgc]], [[5dkf]] - EcCheY (mutant) + BeF3 + Mn + imidazole<br /> | ||
**[[1bdj]] – EcCheY + aerobic respiration control protein HPT domain<BR /> | **[[1bdj]] – EcCheY + aerobic respiration control protein HPT domain<BR /> | ||
**[[1u8t]] – EcCheY + flagellar motor switch protein FLIM<BR /> | **[[1u8t]] – EcCheY + flagellar motor switch protein FLIM<BR /> | ||
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**[[3qta]] – CheC – ''Haloarcula marismortui''<BR /> | **[[3qta]] – CheC – ''Haloarcula marismortui''<BR /> | ||
| - | *CheR | + | *CheR or chemotaxis protein methyltransferase |
**[[1bc5]] – StCheR + chemotaxis receptor peptide <BR /> | **[[1bc5]] – StCheR + chemotaxis receptor peptide <BR /> | ||
**[[1af7]] – StCheR<br /> | **[[1af7]] – StCheR<br /> | ||
| + | **[[5ftw]] – CheR + SAH – ''Bacillus subtilis''<br /> | ||
*CheA | *CheA | ||
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**[[2ld6]] – TmCheA HPT domain - NMR<BR /> | **[[2ld6]] – TmCheA HPT domain - NMR<BR /> | ||
**[[2ch4]] - TmCheA kinase and regulatory domains + CheW<br /> | **[[2ch4]] - TmCheA kinase and regulatory domains + CheW<br /> | ||
| + | **[[4xiv]] - TmCheA kinase and dimerization domains<br /> | ||
**[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br /> | **[[3ur1]], [[4jpb]] – TmCheA + CheW + methyl-accepting Che<br /> | ||
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**[[1qu7]] – EcMcheI cytoplasmic domain<BR /> | **[[1qu7]] – EcMcheI cytoplasmic domain<BR /> | ||
**[[2ld6]] – EcMche peptide - NMR<BR /> | **[[2ld6]] – EcMche peptide - NMR<BR /> | ||
| - | **[[ | + | **[[4z9j]] - EcMcheII LBD <br /> |
**[[2d4u]] – EcMcheI LBD (mutant)<br /> | **[[2d4u]] – EcMcheI LBD (mutant)<br /> | ||
**[[3zx6]] – EcMcheI/HAMP<br /> | **[[3zx6]] – EcMcheI/HAMP<br /> | ||
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**[[3c8c]] – Mche N-terminal <BR /> | **[[3c8c]] – Mche N-terminal <BR /> | ||
**[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR /> | **[[3b47]] – Mche periplasmic domain – ''Geobacter sulfurreducens''<BR /> | ||
| - | **[[ | + | |
| + | *Methyl-accepting chemotaxis protein complex | ||
| + | |||
| + | **[[3atp]] - EcMcheI LBD + serine<BR /> | ||
| + | **[[4z9h]], [[4z9i]] - EcMcheII LBD + aspartic acid<br /> | ||
| + | **[[5ave]] - VcMche LBD + serine<br /> | ||
| + | **[[5avf]] - VcMche LBD + taurine<br /> | ||
*''Heme-containing methyl-accepting chemotaxis protein'' | *''Heme-containing methyl-accepting chemotaxis protein'' | ||
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**[[3m0b]] - TtMche H-Nox domain Ru-porphyrin<br /> | **[[3m0b]] - TtMche H-Nox domain Ru-porphyrin<br /> | ||
**[[3nvr]], [[3nvu]] – TtMche N terminal (mutant)<br /> | **[[3nvr]], [[3nvu]] – TtMche N terminal (mutant)<br /> | ||
| + | **[[4it2]] - CsMche H-Nox domain Mn-porphyrin – ''Caldanaerobacter subterraneus''<br /> | ||
| + | **[[5jru]] - CsMche H-Nox domain Fe-porphyrin <br /> | ||
| + | **[[5jrv]] - CsMche H-Nox domain Fe-porphyrin + NO<br /> | ||
| + | **[[5jrx]] - CsMche H-Nox domain Fe-porphyrin (mutant) + CO<br /> | ||
*Flagellar motor protein FLIN | *Flagellar motor protein FLIN | ||
Revision as of 08:49, 2 April 2017
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3D structures of chemotaxis protein
Updated on 02-April-2017
References
- ↑ Adler J, Tso WW. "Decision"-making in bacteria: chemotactic response of Escherichia coli to conflicting stimuli. Science. 1974 Jun 21;184(4143):1292-4. PMID:4598187
- ↑ Djordjevic S, Stock AM. Chemotaxis receptor recognition by protein methyltransferase CheR. Nat Struct Biol. 1998 Jun;5(6):446-50. PMID:9628482
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Michal Harel, Joel L. Sussman, Lynmarie K Thompson, Alexander Berchansky
