5muj

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'''Unreleased structure'''
 
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The entry 5muj is ON HOLD
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==BT0996 RGII Chain B Complex==
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<StructureSection load='5muj' size='340' side='right' caption='[[5muj]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5muj]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MUJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MUJ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8OQ:ALPHA-D-ACERIC+ACID'>8OQ</scene>, <scene name='pdbligand=8PK:2-O-METHYL,+4-O-ACETYL-ALPHA-L-FUCOSEPYRANOSE'>8PK</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ARA:ALPHA-L-ARABINOSE'>ARA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=RAM:ALPHA-L-RHAMNOSE'>RAM</scene>, <scene name='pdbligand=XXM:(2S,3R,4R)-4-(HYDROXYMETHYL)OXOLANE-2,3,4-TRIOL'>XXM</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5muj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5muj OCA], [http://pdbe.org/5muj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5muj RCSB], [http://www.ebi.ac.uk/pdbsum/5muj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5muj ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The metabolism of carbohydrate polymers drives microbial diversity in the human gut microbiota. It is unclear, however, whether bacterial consortia or single organisms are required to depolymerize highly complex glycans. Here we show that the gut bacterium Bacteroides thetaiotaomicron uses the most structurally complex glycan known: the plant pectic polysaccharide rhamnogalacturonan-II, cleaving all but 1 of its 21 distinct glycosidic linkages. The deconstruction of rhamnogalacturonan-II side chains and backbone are coordinated to overcome steric constraints, and the degradation involves previously undiscovered enzyme families and catalytic activities. The degradation system informs revision of the current structural model of rhamnogalacturonan-II and highlights how individual gut bacteria orchestrate manifold enzymes to metabolize the most challenging glycan in the human diet.
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Authors: Cartmell, A., Basle, A., Ndeh, D., Luis, A.S., Venditto, I., Labourel, A., Rogowski, A., Gilbert, H.J.
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Complex pectin metabolism by gut bacteria reveals novel catalytic functions.,Ndeh D, Rogowski A, Cartmell A, Luis AS, Basle A, Gray J, Venditto I, Briggs J, Zhang X, Labourel A, Terrapon N, Buffetto F, Nepogodiev S, Xiao Y, Field RA, Zhu Y, O'Neill MA, Urbanowicz BR, York WS, Davies GJ, Abbott DW, Ralet MC, Martens EC, Henrissat B, Gilbert HJ Nature. 2017 Mar 22. doi: 10.1038/nature21725. PMID:28329766<ref>PMID:28329766</ref>
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Description: BT0996 RGII Chain B Complex
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Luis, A.S]]
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<div class="pdbe-citations 5muj" style="background-color:#fffaf0;"></div>
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[[Category: Ndeh, D]]
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== References ==
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[[Category: Venditto, I]]
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Basle, A]]
[[Category: Cartmell, A]]
[[Category: Cartmell, A]]
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[[Category: Gilbert, H J]]
[[Category: Labourel, A]]
[[Category: Labourel, A]]
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[[Category: Basle, A]]
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[[Category: Luis, A S]]
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[[Category: Gilbert, H.J]]
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[[Category: Ndeh, D]]
[[Category: Rogowski, A]]
[[Category: Rogowski, A]]
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[[Category: Venditto, I]]
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[[Category: Arabinofuranosidase]]
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[[Category: Glycoside hydrolase]]
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[[Category: Hydrolase]]
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[[Category: Plant pectin]]
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[[Category: Rgii]]

Revision as of 13:23, 5 April 2017

BT0996 RGII Chain B Complex

5muj, resolution 1.37Å

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