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Dehalogenase
From Proteopedia
(Difference between revisions)
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**[[3a2m]], [[3a2n]], [[3afi]] – BjHDH + Cl – ''Bradyrhizobium japonicum''<br /> | **[[3a2m]], [[3a2n]], [[3afi]] – BjHDH + Cl – ''Bradyrhizobium japonicum''<br /> | ||
**[[3a2l]] – BjHDH (mutant) + Cl <br /> | **[[3a2l]] – BjHDH (mutant) + Cl <br /> | ||
| + | **[[5lka]] – BjHDH (mutant) <br /> | ||
**[[4k2a]] – HDH + Cl – ''Bradyrhizobium elkanii''<br /> | **[[4k2a]] – HDH + Cl – ''Bradyrhizobium elkanii''<br /> | ||
**[[3rk4]], [[3sk0]], [[4f5z]], [[4f60]] – RrHDH (mutant) + halide <br /> | **[[3rk4]], [[3sk0]], [[4f5z]], [[4f60]] – RrHDH (mutant) + halide <br /> | ||
| Line 55: | Line 56: | ||
**[[4brz]] – RhHDH + Cl - ''Rhodobacteraceae''<br /> | **[[4brz]] – RhHDH + Cl - ''Rhodobacteraceae''<br /> | ||
**[[4mj3]] – HDH + Cl – ''Mycobacterium rhodesiae''<br /> | **[[4mj3]] – HDH + Cl – ''Mycobacterium rhodesiae''<br /> | ||
| + | **[[3u1t]] – HDH + Cl – unidentified<br /> | ||
*''Haloalkane dehalogenase other complexes'' | *''Haloalkane dehalogenase other complexes'' | ||
| Line 78: | Line 80: | ||
**[[1y37]] – BuFDH – ''Burkholderia''<br /> | **[[1y37]] – BuFDH – ''Burkholderia''<br /> | ||
**[[3r3u]] – RpFDH – ''Rhodopseudomonas palustris''<br /> | **[[3r3u]] – RpFDH – ''Rhodopseudomonas palustris''<br /> | ||
| - | **[[3r40]], [[3r41]] – RpFDH (mutant) <br /> | + | **[[3r40]], [[3r41]], [[5t4t]] – RpFDH (mutant) <br /> |
*''Fluoroacetate dehalogenase complexes'' | *''Fluoroacetate dehalogenase complexes'' | ||
| - | **[[3r3v]], [[3r3y]] – RpFDH (mutant) + fluoroacetate<br /> | + | **[[3r3v]], [[3r3y]], [[5swn]] – RpFDH (mutant) + fluoroacetate<br /> |
**[[3r3w]] – RpFDH (mutant) + chloroacetate<br /> | **[[3r3w]] – RpFDH (mutant) + chloroacetate<br /> | ||
**[[3r3x]] – RpFDH (mutant) + bromoacetate<br /> | **[[3r3x]] – RpFDH (mutant) + bromoacetate<br /> | ||
| Line 102: | Line 104: | ||
**[[4ixw]] – RrHHDH (mutant) + ethyl oxiranyl acetate – ''Rhizobium radiobacter''<br /> | **[[4ixw]] – RrHHDH (mutant) + ethyl oxiranyl acetate – ''Rhizobium radiobacter''<br /> | ||
**[[4iy1]] – RrHHDH + Cl<br /> | **[[4iy1]] – RrHHDH + Cl<br /> | ||
| + | **[[5kwe]] – RrHHDH (mutant) + Cl<br /> | ||
| + | **[[5kvc]] – RrHHDH (mutant) + imidazole + Cl<br /> | ||
*L-2-haloacid dehalogenase (LHDH) | *L-2-haloacid dehalogenase (LHDH) | ||
Revision as of 10:36, 12 April 2017
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3D structures of dehalogenase
Updated on 12-April-2017
References
- ↑ Koudelakova T, Chovancova E, Brezovsky J, Monincova M, Fortova A, Jarkovsky J, Damborsky J. Substrate specificity of haloalkane dehalogenases. Biochem J. 2011 Apr 15;435(2):345-54. doi: 10.1042/BJ20101405. PMID:21294712 doi:http://dx.doi.org/10.1042/BJ20101405
- ↑ Verschueren KH, Kingma J, Rozeboom HJ, Kalk KH, Janssen DB, Dijkstra BW. Crystallographic and fluorescence studies of the interaction of haloalkane dehalogenase with halide ions. Studies with halide compounds reveal a halide binding site in the active site. Biochemistry. 1993 Sep 7;32(35):9031-7. PMID:8369276
