5gm9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5gm9 is ON HOLD until Jul 13 2018
+
==Crystal structure of a glycoside hydrolase in complex with cellobiose==
 +
<StructureSection load='5gm9' size='340' side='right' caption='[[5gm9]], [[Resolution|resolution]] 1.36&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5gm9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GM9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GM9 FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CBI:CELLOBIOSE'>CBI</scene>, <scene name='pdbligand=CBK:4-O-BETA-D-GLUCOPYRANOSYL-ALPHA-D-GLUCOPYRANOSE'>CBK</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5glx|5glx]], [[5gly|5gly]]</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gm9 OCA], [http://pdbe.org/5gm9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gm9 RCSB], [http://www.ebi.ac.uk/pdbsum/5gm9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gm9 ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
1,4-beta-Endoglucanase is one of the most important biocatalysts in modern industries. Here, a glycoside hydrolase (GH) family 45 endoglucanase from thermophilic fungus Theilavia terrestris (TtCel45A) was expressed in Pichia pastoris. The recombinant protein shows optimal activity at 60 degrees C, pH 4-5. The enzyme exhibits extraordinary thermostability that more than 80% activity was detected after heating at 80 degrees C for 2.5h. The high resolution crystal structures of apo-form enzyme and that in complex with cellobiose and cellotetraose were solved to 1.36-1.58A. The protein folds into two overall regions: one is a six-stranded beta-barrel, and the other one consists of several extended loops. Between the two regions lies the substrate-binding channel, which is an open cleft spanning across the protein surface. A continuous substrate-binding cleft from subsite -4 to +3 were clearly identified in the complex structures. Notably, the flexible V-VI loop (113Gly-114Gly-115Asp-116Leu-117Gly-118Ser) is found to open in the presence of -1 sugar, with D115 and L116 swung away to yield a space to accommodate the catalytic acid D122 and the 2,5B boat conformation of -1 sugar during transition state. Collectively, we characterized the enzyme properties of P. pastoris-expressed TtCel45A and solved high-resolution crystal structures of the enzyme. These results are of great interests in industrial applications and provide new insights into the fundamental understanding of enzyme catalytic mechanism of GH45 endoglucanases.
-
Authors: Gao, J., Liu, W.D., Zheng, Y.Y., Chen, C.C., Guo, R.T.
+
Characterization and crystal structure of a thermostable glycoside hydrolase family 45 1,4-beta-endoglucanase from Thielavia terrestris.,Gao J, Huang JW, Li Q, Liu W, Ko TP, Zheng Y, Xiao X, Kuo CJ, Chen CC, Guo RT Enzyme Microb Technol. 2017 Apr;99:32-37. doi: 10.1016/j.enzmictec.2017.01.005., Epub 2017 Jan 17. PMID:28193329<ref>PMID:28193329</ref>
-
Description: Crystal structure of a glycoside hydrolase in complex with cellobiose
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Chen, C.C]]
+
<div class="pdbe-citations 5gm9" style="background-color:#fffaf0;"></div>
-
[[Category: Liu, W.D]]
+
== References ==
-
[[Category: Guo, R.T]]
+
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Chen, C C]]
[[Category: Gao, J]]
[[Category: Gao, J]]
-
[[Category: Zheng, Y.Y]]
+
[[Category: Guo, R T]]
 +
[[Category: Liu, W D]]
 +
[[Category: Zheng, Y Y]]
 +
[[Category: Cellulase]]
 +
[[Category: Hydrolase]]
 +
[[Category: Inhibitor]]
 +
[[Category: Substrate binding]]

Revision as of 12:56, 19 April 2017

Crystal structure of a glycoside hydrolase in complex with cellobiose

5gm9, resolution 1.36Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools