5gm9
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of a glycoside hydrolase in complex with cellobiose== | |
+ | <StructureSection load='5gm9' size='340' side='right' caption='[[5gm9]], [[Resolution|resolution]] 1.36Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5gm9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5GM9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5GM9 FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CBI:CELLOBIOSE'>CBI</scene>, <scene name='pdbligand=CBK:4-O-BETA-D-GLUCOPYRANOSYL-ALPHA-D-GLUCOPYRANOSE'>CBK</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5glx|5glx]], [[5gly|5gly]]</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5gm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5gm9 OCA], [http://pdbe.org/5gm9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5gm9 RCSB], [http://www.ebi.ac.uk/pdbsum/5gm9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5gm9 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | 1,4-beta-Endoglucanase is one of the most important biocatalysts in modern industries. Here, a glycoside hydrolase (GH) family 45 endoglucanase from thermophilic fungus Theilavia terrestris (TtCel45A) was expressed in Pichia pastoris. The recombinant protein shows optimal activity at 60 degrees C, pH 4-5. The enzyme exhibits extraordinary thermostability that more than 80% activity was detected after heating at 80 degrees C for 2.5h. The high resolution crystal structures of apo-form enzyme and that in complex with cellobiose and cellotetraose were solved to 1.36-1.58A. The protein folds into two overall regions: one is a six-stranded beta-barrel, and the other one consists of several extended loops. Between the two regions lies the substrate-binding channel, which is an open cleft spanning across the protein surface. A continuous substrate-binding cleft from subsite -4 to +3 were clearly identified in the complex structures. Notably, the flexible V-VI loop (113Gly-114Gly-115Asp-116Leu-117Gly-118Ser) is found to open in the presence of -1 sugar, with D115 and L116 swung away to yield a space to accommodate the catalytic acid D122 and the 2,5B boat conformation of -1 sugar during transition state. Collectively, we characterized the enzyme properties of P. pastoris-expressed TtCel45A and solved high-resolution crystal structures of the enzyme. These results are of great interests in industrial applications and provide new insights into the fundamental understanding of enzyme catalytic mechanism of GH45 endoglucanases. | ||
- | + | Characterization and crystal structure of a thermostable glycoside hydrolase family 45 1,4-beta-endoglucanase from Thielavia terrestris.,Gao J, Huang JW, Li Q, Liu W, Ko TP, Zheng Y, Xiao X, Kuo CJ, Chen CC, Guo RT Enzyme Microb Technol. 2017 Apr;99:32-37. doi: 10.1016/j.enzmictec.2017.01.005., Epub 2017 Jan 17. PMID:28193329<ref>PMID:28193329</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | [[Category: Chen, C | + | <div class="pdbe-citations 5gm9" style="background-color:#fffaf0;"></div> |
- | + | == References == | |
- | + | <references/> | |
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Chen, C C]] | ||
[[Category: Gao, J]] | [[Category: Gao, J]] | ||
- | [[Category: Zheng, Y | + | [[Category: Guo, R T]] |
+ | [[Category: Liu, W D]] | ||
+ | [[Category: Zheng, Y Y]] | ||
+ | [[Category: Cellulase]] | ||
+ | [[Category: Hydrolase]] | ||
+ | [[Category: Inhibitor]] | ||
+ | [[Category: Substrate binding]] |
Revision as of 12:56, 19 April 2017
Crystal structure of a glycoside hydrolase in complex with cellobiose
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Categories: Chen, C C | Gao, J | Guo, R T | Liu, W D | Zheng, Y Y | Cellulase | Hydrolase | Inhibitor | Substrate binding