1uww
From Proteopedia
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|PDB= 1uww |SIZE=350|CAPTION= <scene name='initialview01'>1uww</scene>, resolution 1.40Å | |PDB= 1uww |SIZE=350|CAPTION= <scene name='initialview01'>1uww</scene>, resolution 1.40Å | ||
|SITE= <scene name='pdbsite=AC7:Ca+Binding+Site+For+Chain+A'>AC7</scene> | |SITE= <scene name='pdbsite=AC7:Ca+Binding+Site+For+Chain+A'>AC7</scene> | ||
| - | |LIGAND= <scene name='pdbligand=CA:CALCIUM ION'>CA</scene> | + | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] </span> |
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uww FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uww OCA], [http://www.ebi.ac.uk/pdbsum/1uww PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1uww RCSB]</span> | ||
}} | }} | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1UWW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/ | + | 1UWW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_akibai Bacillus akibai]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UWW OCA]. |
==Reference== | ==Reference== | ||
X-ray crystal structure of a non-crystalline cellulose-specific carbohydrate-binding module: CBM28., Jamal S, Nurizzo D, Boraston AB, Davies GJ, J Mol Biol. 2004 May 28;339(2):253-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15136030 15136030] | X-ray crystal structure of a non-crystalline cellulose-specific carbohydrate-binding module: CBM28., Jamal S, Nurizzo D, Boraston AB, Davies GJ, J Mol Biol. 2004 May 28;339(2):253-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15136030 15136030] | ||
| - | [[Category: Bacillus | + | [[Category: Bacillus akibai]] |
[[Category: Cellulase]] | [[Category: Cellulase]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
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[[Category: Jamal, S.]] | [[Category: Jamal, S.]] | ||
[[Category: Nurizzo, D.]] | [[Category: Nurizzo, D.]] | ||
| - | [[Category: CA]] | ||
[[Category: binding]] | [[Category: binding]] | ||
[[Category: carbohydrate binding module]] | [[Category: carbohydrate binding module]] | ||
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[[Category: lectin]] | [[Category: lectin]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:16:26 2008'' |
Revision as of 21:16, 30 March 2008
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| , resolution 1.40Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | |||||||
| Ligands: | , | ||||||
| Activity: | Cellulase, with EC number 3.2.1.4 | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
X-RAY CRYSTAL STRUCTURE OF A NON-CRYSTALLINE CELLULOSE SPECIFIC CARBOHYDRATE-BINDING MODULE: CBM28.
Overview
Natural cellulose exists as a composite of different forms, which have historically been broadly characterized as "crystalline" or "amorphous". The recognition of both of these forms of cellulose by the carbohydrate-binding modules (CBM) of microbial glycoside hydrolases is central to natural and efficient biotechnological conversion of plant cell wall biomass. There is increasing evidence that, at least some, individual binding modules target distinct and different regions of non-crystalline "amorphous" cellulose. Competition experiments show that CBM28 modules do not compete with CBM17 modules when binding to non-crystalline cellulose. The structure of the BspCBM28 (http://afmb.cnrs-mrs.fr/CAZY/) module from the Bacillus sp. 1139 family GH5 endoglucanase, comprising a 191 amino acid protein, has therefore been determined at 1.4A resolution using single isomorphous replacement with anomalous scattering methods. The structure reveals a "beta-jelly roll" topology, with high degree of similarity to the structure of CBM17 domains. Sequence and structural conservation strongly suggests that these two families of domains have evolved through gene duplication and subsequent divergence. The ligand-binding site "topographies" of CBMs from families 28, 17 and 4 begins to shed light on the differential recognition of non-crystalline cellulose by multi-modular plant cell wall-degrading enzymes.
About this Structure
1UWW is a Single protein structure of sequence from Bacillus akibai. Full crystallographic information is available from OCA.
Reference
X-ray crystal structure of a non-crystalline cellulose-specific carbohydrate-binding module: CBM28., Jamal S, Nurizzo D, Boraston AB, Davies GJ, J Mol Biol. 2004 May 28;339(2):253-8. PMID:15136030
Page seeded by OCA on Mon Mar 31 00:16:26 2008
Categories: Bacillus akibai | Cellulase | Single protein | Boraston, A. | Davies, G J. | Jamal, S. | Nurizzo, D. | Binding | Carbohydrate binding module | Cbm | Cellulose | Glucan | Glycosidase | Hydrolase | Lectin
