Monooxygenase
From Proteopedia
(Difference between revisions)
Line 18: | Line 18: | ||
*'''Toluene 4-monooxygenase (TMO)''' | *'''Toluene 4-monooxygenase (TMO)''' | ||
- | **[[3dhg]], [[3i5j]] – PmTMO α+β+γ subunits + Fe – ''Pseudomonas mendocina''<br /> | + | **[[3dhg]], [[3i5j]], [[2inc]] – PmTMO α+β+γ subunits + Fe – ''Pseudomonas mendocina''<br /> |
+ | **[[2ind]] – PmTMO α+β+γ subunits + Mn <br /> | ||
+ | **[[3rng]], [[3rnf]], [[3rne]], [[3rnc]], [[3rnb]], [[3rna]], [[3rn9]], [[3n20]], [[3n1z]], [[3n1y]], [[3n1x]], [[2rdb]] – PmTMO α+β+γ subunits (mutant) + Fe <br /> | ||
**[[1sjg]] – PmTMO protein C + Fe <br /> | **[[1sjg]] – PmTMO protein C + Fe <br /> | ||
**[[1vm9]] – PmTMO protein C (mutant) + Fe <br /> | **[[1vm9]] – PmTMO protein C (mutant) + Fe <br /> | ||
+ | **[[2bf5]], [[2bf3]], [[2bf2]] – PmTMO protein D <br /> | ||
+ | **[[4wqm]] – PmTMO (mutant) + Ni <br /> | ||
+ | **[[4p1c]], [[4p1b]] – PmTMO protein A+B+E+ferredoxin (mutant) + Fe <br /> | ||
+ | **[[2q3w]] – PmTMO ferredoxin subunit (mutant) + Fe <br /> | ||
*TMO complexes | *TMO complexes | ||
**[[3dhh]], [[3q3n]], [[3q3o]] – PmTMO α+β+γ subunits + Fe + phenol derivative + TMO system effector protein<br /> | **[[3dhh]], [[3q3n]], [[3q3o]] – PmTMO α+β+γ subunits + Fe + phenol derivative + TMO system effector protein<br /> | ||
- | **[[3rmk]] – PmTMO α+β+γ subunits + Fe + phenol derivative<br /> | + | **[[3rmk]], [[1t0s]], [[1t0q]] – PmTMO α+β+γ subunits + Fe + phenol derivative<br /> |
**[[3q14]] – PmTMO α+β+γ subunits + Fe + p-cresol + TMO system effector protein<br /> | **[[3q14]] – PmTMO α+β+γ subunits + Fe + p-cresol + TMO system effector protein<br /> | ||
**[[3q2a]], [[3q3m]] – PmTMO α+β+γ subunits + Fe + benzoate inhibitor + TMO system effector protein<br /> | **[[3q2a]], [[3q3m]] – PmTMO α+β+γ subunits + Fe + benzoate inhibitor + TMO system effector protein<br /> | ||
Line 31: | Line 37: | ||
**[[3ge3]], [[3ge8]], [[3ri7]] – PmTMO α (mutant)+β+γ subunits + Fe + TMO system effector protein<br /> | **[[3ge3]], [[3ge8]], [[3ri7]] – PmTMO α (mutant)+β+γ subunits + Fe + TMO system effector protein<br /> | ||
**[[3i63]] – PmTMO α+β+γ subunits + Fe + TMO system effector protein + H2O2<br /> | **[[3i63]] – PmTMO α+β+γ subunits + Fe + TMO system effector protein + H2O2<br /> | ||
+ | **[[5tdv]] – PmTMO protein A+B+D+E + Fe + peroxide<br /> | ||
+ | **[[5tdu]] – PmTMO protein A+B+D+E + Fe + cresol<br /> | ||
+ | **[[5tdt]] – PmTMO protein A+B+D+E + Fe + peroxide + toluene<br /> | ||
+ | **[[5tds]] – PmTMO protein A+B+D+E + Fe + toluene<br /> | ||
+ | **[[1t0r]] – PsTMO + Fe + OH – ''Pseudomonas stutzeri''<br /> | ||
*'''Heme-degrading monooxygenase (IsdI)''' | *'''Heme-degrading monooxygenase (IsdI)''' | ||
**[[2zdp]] – SaIsdI + heme-Co – ''Staphylococcus aureus''<br /> | **[[2zdp]] – SaIsdI + heme-Co – ''Staphylococcus aureus''<br /> | ||
- | **[[3lgm]] – SaIsdI + heme-Fe<br /> | + | **[[3lgm]], [[2zdo]] – SaIsdI + heme-Fe<br /> |
**[[4fnh]] – SaIsdI (mutant) + heme-Fe<br /> | **[[4fnh]] – SaIsdI (mutant) + heme-Fe<br /> | ||
**[[3lgn]] – SaIsdI + heme-Fe + O2<br /> | **[[3lgn]] – SaIsdI + heme-Fe + O2<br /> | ||
**[[3qgp]] – SaIsdI + heme-Fe + CN<br /> | **[[3qgp]] – SaIsdI + heme-Fe + CN<br /> | ||
**[[4fni]] – SaIsdI (mutant) + heme-Fe + CN<br /> | **[[4fni]] – SaIsdI (mutant) + heme-Fe + CN<br /> | ||
+ | **[[4nl5]] – MtMO + heme + CN – ''Mycobacterium tuberculosis''<br /> | ||
+ | **[[4oz5]] – MO + heme – ''Bacillus subtilis''<br /> | ||
*'''Kynurenine 3-monooxygenase (KMO)''' | *'''Kynurenine 3-monooxygenase (KMO)''' | ||
Line 45: | Line 58: | ||
**[[4j2w]], [[4j31]], [[4j33]], [[4j34]] – yKMO + FAD – yeast<br /> | **[[4j2w]], [[4j31]], [[4j33]], [[4j34]] – yKMO + FAD – yeast<br /> | ||
**[[4j36]] – yKMO + FAD + inhibitor<br /> | **[[4j36]] – yKMO + FAD + inhibitor<br /> | ||
+ | **[[5na5]] – PfKMO (mutant) + FAD – ''Pseudomonas fluorescens''<br /> | ||
+ | **[[5nak]] – PfKMO (mutant) + FAD + kynurenine <br /> | ||
+ | **[[5nah]], [[5nag]], [[5nae]], [[5nab]], [[5n7t]], [[5mzk]], [[5mzi]], [[5mzc]], [[5fn0]] – PfKMO (mutant) + FAD + inhibitor<br /> | ||
*'''Phenol 2-monooxygenase (PMO)''' | *'''Phenol 2-monooxygenase (PMO)''' | ||
Line 66: | Line 82: | ||
**[[2gv8]] – fyMO + FAD + NADP – fission yeast<br /> | **[[2gv8]] – fyMO + FAD + NADP – fission yeast<br /> | ||
**[[2gvc]] – fyMO + FAD + NADP + methimazole<br /> | **[[2gvc]] – fyMO + FAD + NADP + methimazole<br /> | ||
- | **[[4a9w]] – | + | **[[4a9w]] – SmMO + FAD – ''Stenotrophomonas maltophilia''<br /> |
+ | **[[4c5o]] – SmMO (mutant) + FAD <br /> | ||
+ | **[[5wan]] – MO + FMN + uracil – Escherichia coli<br /> | ||
+ | **[[5iq4]], [[5iq1]], [[5ipy]] – RnMO (mutant) + FAD + NAP – ''Roseovarius nubinhibens'' <br /> | ||
+ | **[[5gsn]] – RnMO (mutant) + FAD + NAP + methimazole <br /> | ||
+ | **[[4usr]] – PsMO + FAD <br /> | ||
+ | **[[3rp6]] – KpMO + FAD – ''Klebsiella pneumoniae''<br /> | ||
+ | **[[3rp8]] – KpMO (mutant) + FAD <br /> | ||
+ | **[[3rp7]] – KpMO + FAD + uric acid<br /> | ||
+ | **[[3c96]], [[2rgj]] – PaMO + FAD – ''Pseudomonas aeruginosa''<br /> | ||
+ | **[[2xvf]], [[2xve]] – MaMO + FAD – ''Methylophaga aminisulfidivorans'' <br /> | ||
+ | **[[2xvj]] – MaMO (mutant) + FAD + indole <br /> | ||
+ | **[[2xvi]] – MaMO (mutant) + FAD + O2<br /> | ||
+ | **[[2vqb]] – MaMO (mutant) + FAD + NADP + O2<br /> | ||
+ | **[[2xvh]], [[2xlu]], [[2xlt]] – MaMO + FAD + NADP derivative<br /> | ||
+ | **[[2xls]], [[2xlr]], [[2xlp]], [[2vq7]] – MaMO (mutant) + FAD + NADP <br /> | ||
- | * | + | *Pentachlorophenol 4-monooxygenase |
+ | **[[5kox]] – NfMO + FAD – ''Nocardia farcinica''<br /> | ||
+ | **[[5kox]] – NfMO + FAD + rifampicin <br /> | ||
+ | *2,4,6-trichlorophenol 4-monooxygenase | ||
+ | |||
+ | **[[4g5e]] – MO – ''Cupriavidus necator''<br /> | ||
+ | |||
+ | *Chlorophenol 4-monooxygenase | ||
+ | |||
+ | **[[4oo2]] – MO – ''Streptomyces globisporus''<br /> | ||
+ | **[[3k86]], [[3hwc]] – BcMO – ''Burkholderia cepacia'' <br /> | ||
+ | **[[3k87]] – BcMO + FAD <br /> | ||
+ | **[[3k88]] – BcMO + FAD + NAD <br /> | ||
+ | |||
+ | *Phenylacetone monooxygenase | ||
+ | |||
+ | **[[4ovi]], [[4c74]] – TfMO + FAD + APADP – ''Thermobifida fusca''<br /> | ||
+ | **[[1w4x]] – TfMO + FAD<br /> | ||
+ | **[[2ylt]], [[2yls]], [[2ylr]] – TfMO + FAD + NADP <br /> | ||
+ | **[[2ylz]] – TfMO (mutant) + FAD <br /> | ||
+ | **[[4c77]] – TfMO (mutant) + FAD + APADP <br /> | ||
+ | **[[4d04]] – TfMO (mutant) + FAD + NAP <br /> | ||
+ | **[[4d03]], [[2ym2]], [[2ylx]], [[2ylw]] – TfMO (mutant) + FAD + NADP <br /> | ||
+ | **[[2ym1]] – TfMO (mutant) + FAD + NADP + O2<br /> | ||
+ | |||
+ | *6-hydroxynicotinate 3-monooxygenase | ||
+ | |||
+ | **[[5eow]] – PpMO + FAD – ''Pseudomonas putida''<br /> | ||
+ | |||
+ | *Styrene monooxygenase | ||
+ | |||
+ | **[[3ihm]] – PpMO <br /> | ||
+ | **[[4f07]] – PpMO (mutant) + FAD <br /> | ||
+ | |||
+ | *Tryptophan 2-monooxygenase | ||
+ | |||
+ | **[[4iv9]] – MO + FAD – ''Pseudomonas savastanoi''<br /> | ||
+ | |||
+ | *Tryptophan 5-monooxygenase | ||
+ | |||
+ | **[[1mlw]] – hMO + Fe + dihydrobiopterin <br /> | ||
+ | |||
+ | *Tyrosine 3-monooxygenase | ||
+ | |||
+ | **[[2xsn]] – hMO + Zn<br /> | ||
+ | **[[2toh]] – rMO + Fe + dihydrobiopterin + tyrosine - rat<br /> | ||
+ | **[[2mda]] – rMO regulatory domain <br /> | ||
+ | |||
+ | *Nitronate monooxygenase | ||
+ | |||
+ | **[[4q4k]] – PaMO + FMN <br /> | ||
+ | **[[5lsm]] – MO + FMN – ''Shewanella oneidensis''<br /> | ||
+ | |||
+ | *2-hydroxbiphenyl 3-monooxygenase | ||
+ | |||
+ | **[[4z2r]] – PnMO + FAD – ''Pseudomonas nitroreducens''<br /> | ||
+ | **[[4cy6]] – PnMO (mutant) <br /> | ||
+ | **[[4z2u]], [[4z2t]], [[4cy8]] – PnMO (mutant) + FAD <br /> | ||
+ | **[[5brt]] – PnMO + FAD + hydroxybephenyl <br /> | ||
+ | |||
+ | *4-hydroxyphenylacetate 3-monooxygenase | ||
+ | |||
+ | **[[4ira]] – BmMO + FAD – Brucella melitensis<br /> | ||
+ | **[[3cb0]] – BmMO + FMN<br /> | ||
+ | |||
+ | *Ornithine N(5)-monooxygenase | ||
+ | |||
+ | **[[5cku]] – MO + FAD + NADP + ornithine – ''Neosartorya fumigata''<br /> | ||
+ | **[[4nzh]], [[4b69]] – AfMO + FAD + ornithine – ''Aspergillus fumigatus''<br /> | ||
+ | **[[4b65]] – AfMO + FAD + NADP <br /> | ||
+ | **[[4b68]], [[4b66]] – AfMO + FAD + NAP + arginine <br /> | ||
+ | **[[4b67]], [[4b63]] – AfMO + FAD + NADP + ornithine <br /> | ||
+ | **[[4b64]] – AfMO + FAD + NADP + lysine <br /> | ||
+ | **[[3s61]], [[5s5w]] – PaMO + FAD + NADP + ornithine derivative<br /> | ||
+ | |||
+ | *Steroid monooxygenase | ||
+ | |||
+ | **[[4ap1]], [[4aos]] – RrMO + FAD + NADP – ''Rhodococcus rhodochrous''<br /> | ||
+ | **[[4aox]] – RrMO (mutant) + FAD <br /> | ||
+ | **[[4ap3]] – RrMO (mutant) + FAD + NADP <br /> | ||
+ | |||
+ | *Cyclohexanone monooxygenase | ||
+ | |||
+ | **[[5m10]] – TmMO + FAD + NAP + nicotinamide – ''Thermocripsum municipale''''Italic text''<br /> | ||
+ | **[[5m0z]] – TmMO + FAD + NADP derivative <br /> | ||
+ | **[[4rg4]], [[4rg3]], [[3gwf]], [[3gwd]] – RhMO + FAD + NAP + caprolactone – ''Rhodococcus''<br /> | ||
+ | **[[3ucl]] – RhMO + FAD + NADP + cyclohexanone <br /> | ||
+ | |||
+ | *Lysine 6-monooxygenase | ||
+ | |||
+ | **[[5cqf]] – MO – ''Pseudomonas syringae''<br /> | ||
+ | **[[4d7e]] – MO (mutant) + FAD – ''Nocardia farcinica''<br /> | ||
+ | |||
+ | *EDTA monooxygenase | ||
+ | |||
+ | **[[5dqp]] – MO – ''Chelativorans''<br /> | ||
+ | |||
+ | *3,6-diketocamphane 1,6 monooxygenase | ||
+ | |||
+ | **[[5aec]] – PpMO <br /> | ||
+ | **[[4uwm]] – PpMO + FMN<br /> | ||
+ | |||
+ | *Lytic polysaccharide monooxygenase | ||
+ | |||
+ | **[[5tki]], [[5foh]], [[4qi8]] – NcMO-2 + Cu – ''Neurospora crassa''''Italic text''<br /> | ||
+ | **[[5tkh]], [[5tkg]], [[5tkf]], [[4eir]] – NcMO-2 + Cu + O2 <br /> | ||
+ | **[[4eis]] – NcMO-3 + Cu + peroxide <br /> | ||
+ | **[[5iju]] – MO + Cu – ''Bacillus amyloliquefaciens''<br /> | ||
+ | **[[5acj]], [[5aci]], [[5ach]], [[5acg]], [[5acf]] – MO + Cu – ''Lentinus similis''<br /> | ||
+ | **[[4mai]] – moMO + Cu – mold<br /> | ||
+ | **[[4mah]] – moMO + Zn<br /> | ||
+ | |||
+ | *Peptidyl-glycine alpha-amidating monooxygenase | ||
+ | |||
+ | **[[3mib]], [[3mic]], [[3mid]], [[3mie]], [[3mif]], [[3mig]], [[3mih]], [[3mlj]], [[3mlk]], [[3mll]], [[1opm]] – rMO + Cu + Ni <br /> | ||
+ | **[[1sdw]] – rMO + Cu + Ni + O2 + threonine derivative<br /> | ||
+ | **[[1yjl]] – rMO (mutant)<br /> | ||
+ | **[[1yjk]], [[1yip]], [[1phm]] – rMO + Cu<br /> | ||
+ | **[[1yi9]] – rMO (mutant) + Cu<br /> | ||
+ | **[[3fw0]] – rMO + Hg<br /> | ||
+ | **[[3fvz]] – rMO + Zn + Fe<br /> | ||
+ | |||
+ | *Antibiotic biosynthesis monooxygenase | ||
+ | |||
+ | **[[4hl9]] – MO – ''Rhodospirillum rubrum''<br /> | ||
+ | **[[4dn9]] – MO – ''Chloroflexus aurantiacus''<br /> | ||
+ | **[[2ril]] – MO – ''Shewanella loihica''<br /> | ||
+ | |||
+ | *Monooxygenase | ||
+ | |||
+ | **[[2i7g]] – MO – ''Agrobacterium tumefaciens''<br /> | ||
+ | **[[5uq4]] – MtMO <br /> | ||
+ | **[[5f5l]] – MiMO – ''Micromonospora'' <br /> | ||
+ | **[[5f5n]] – MiMO + NAD + substrate <br /> | ||
'''Methane monooxygenase''' See [[Methane monooxygenase]] | '''Methane monooxygenase''' See [[Methane monooxygenase]] |
Revision as of 10:07, 25 July 2017
|
3D structures of monooxygenase
Updated on 25-July-2017
Methane monooxygenase See Methane monooxygenase
Camphor 5-monooxygenase See Cytochrome P450
Luciferin 4-monooxygenase and Alkanal monooxygenase See Luciferase
References
- ↑ Rudzka K, Moreno DM, Eipper B, Mains R, Estrin DA, Amzel LM. Coordination of peroxide to the Cu(M) center of peptidylglycine alpha-hydroxylating monooxygenase (PHM): structural and computational study. J Biol Inorg Chem. 2012 Dec 18. PMID:23247335 doi:10.1007/s00775-012-0967-z
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, Joel L. Sussman, Alexander Berchansky, Jaime Prilusky