5mif
From Proteopedia
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| - | '''Unreleased structure'''  | ||
| - | + | ==Crystal structure of carboxyl esterase 2 (TmelEST2) from mycorrhizal fungus Tuber melanosporum==  | |
| + | <StructureSection load='5mif' size='340' side='right' caption='[[5mif]], [[Resolution|resolution]] 2.14Å' scene=''>  | ||
| + | == Structural highlights ==  | ||
| + | <table><tr><td colspan='2'>[[5mif]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MIF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MIF FirstGlance]. <br>  | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRT:FRAGMENT+OF+TRITON+X-100'>TRT</scene></td></tr>  | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mif FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mif OCA], [http://pdbe.org/5mif PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mif RCSB], [http://www.ebi.ac.uk/pdbsum/5mif PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mif ProSAT]</span></td></tr>  | ||
| + | </table>  | ||
| + | <div style="background-color:#fffaf0;">  | ||
| + | == Publication Abstract from PubMed ==  | ||
| + | An increasing number of esterases is being revealed by (meta) genomic sequencing projects, but few of them are functionally/structurally characterized, especially enzymes of fungal origin. Starting from a three-member gene family of secreted putative "lipases/esterases" preferentially expressed in the symbiotic phase of the mycorrhizal fungus Tuber melanosporum ("black truffle"), we show here that these enzymes (TmelEST1-3) are dimeric, heat-resistant carboxylesterases capable of hydrolyzing various short/medium chain p-nitrophenyl esters. TmelEST2 was the most active (kcat = 2302 s-1 for p-nitrophenyl-butyrate) and thermally stable (T50 = 68.3 degrees C), while TmelEST3 was the only one displaying some activity on tertiary alcohol esters. X-ray diffraction analysis of TmelEST2 revealed a classical alpha/beta hydrolase-fold structure, with a network of dimer-stabilizing intermolecular interactions typical of archaea esterases. The predicted structures of TmelEST1 and 3 are overall quite similar to that of TmelEST2 but with some important differences. Most notably, the much smaller volume of the substrate-binding pocket and the more acidic electrostatic surface profile of TmelEST1. This was also the only TmelEST capable of hydrolyzing feruloyl-esters, suggestinng a possible role in root cell-wall deconstruction during symbiosis establishment. In addition to their potential biotechnological interest, TmelESTs raise important questions regarding the evolutionary recruitment of archaea-like enzymes into mesophilic subterranean fungi such as truffles.  | ||
| - | + | A family of archaea-like carboxylesterases preferentially expressed in the symbiotic phase of the mychorrizal fungus Tuber melanosporum.,Cavazzini D, Grossi G, Levati E, Vallese F, Montanini B, Bolchi A, Zanotti G, Ottonello S Sci Rep. 2017 Aug 9;7(1):7628. doi: 10.1038/s41598-017-08007-9. PMID:28794466<ref>PMID:28794466</ref>  | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>  | |
| - | + | </div>  | |
| + | <div class="pdbe-citations 5mif" style="background-color:#fffaf0;"></div>  | ||
| + | == References ==  | ||
| + | <references/>  | ||
| + | __TOC__  | ||
| + | </StructureSection>  | ||
[[Category: Cavazzini, D]]  | [[Category: Cavazzini, D]]  | ||
| - | [[Category: Zanotti, G]]  | ||
[[Category: Ottonello, S]]  | [[Category: Ottonello, S]]  | ||
[[Category: Valesse, F]]  | [[Category: Valesse, F]]  | ||
| + | [[Category: Zanotti, G]]  | ||
| + | [[Category: Hydrolase]]  | ||
| + | [[Category: Lipase alpha/beta hydrolase fold archaebacterial-like enzyme]]  | ||
Revision as of 10:58, 24 August 2017
Crystal structure of carboxyl esterase 2 (TmelEST2) from mycorrhizal fungus Tuber melanosporum
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