5nz2

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'''Unreleased structure'''
 
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The entry 5nz2 is ON HOLD
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==Twist and induce: Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80 dUTPase. D95E mutant from dUTPase 80alpha phage.==
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<StructureSection load='5nz2' size='340' side='right' caption='[[5nz2]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5nz2]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NZ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NZ2 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DUP:2-DEOXYURIDINE+5-ALPHA,BETA-IMIDO-TRIPHOSPHATE'>DUP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nz2 OCA], [http://pdbe.org/5nz2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nz2 RCSB], [http://www.ebi.ac.uk/pdbsum/5nz2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nz2 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The trimeric staphylococcal phage-encoded dUTPases (Duts) are signalling molecules that induce the cycle of some Staphylococcal pathogenicity islands (SaPIs) by binding to the SaPI-encoded Stl repressor. To perform this regulatory role, these Duts require an extra motif VI, as well as the Dut conserved motifs IV and V. While the apo form of Dut is required for the interaction with the Stl repressor, usually only those Duts with normal enzymatic activity can induce the SaPI cycle. To understand the link between the enzymatic activities and inducing capacities of the Dut protein, we analysed the structural, biochemical and physiological characteristics of the Dut80alpha D95E mutant, which loses the SaPI cycle induction capacity despite retaining enzymatic activity. Asp95 is located at the threefold central channel of the trimeric Dut where it chelates a divalent ion. Here, using state-of-the-art techniques, we demonstrate that D95E mutation has an epistatic effect on the motifs involved in Stl binding. Thus, ion binding in the central channel correlates with the capacity of motif V to twist and order in the SaPI-inducing disposition, while the tip of motif VI is disturbed. These alterations in turn reduce the affinity for the Stl repressor and the capacity to induce the SaPI cycle.
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Authors: Alite, C., Humphrey, S., Donderis, J., Maiques, E., Ciges-Tomas, J.R., Penades, J.R., Marina, A.
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Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80alpha dUTPase.,Alite C, Humphrey S, Donderis J, Maiques E, Ciges-Tomas JR, Penades JR, Marina A Sci Rep. 2017 Sep 11;7(1):11234. doi: 10.1038/s41598-017-11234-9. PMID:28894239<ref>PMID:28894239</ref>
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Description: Twist and induce: Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80 dUTPase. D95E mutant from dUTPase 80alpha phage.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Penades, J.R]]
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<div class="pdbe-citations 5nz2" style="background-color:#fffaf0;"></div>
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[[Category: Ciges-Tomas, J.R]]
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== References ==
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[[Category: Humphrey, S]]
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<references/>
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[[Category: Maiques, E]]
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__TOC__
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</StructureSection>
[[Category: Alite, C]]
[[Category: Alite, C]]
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[[Category: Ciges-Tomas, J R]]
[[Category: Donderis, J]]
[[Category: Donderis, J]]
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[[Category: Humphrey, S]]
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[[Category: Maiques, E]]
[[Category: Marina, A]]
[[Category: Marina, A]]
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[[Category: Penades, J R]]
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[[Category: 80 phage]]
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[[Category: Dutpase]]
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[[Category: Hydrolase]]
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[[Category: S aureus]]

Revision as of 04:26, 21 September 2017

Twist and induce: Dissecting the link between the enzymatic activity and the SaPI inducing capacity of the phage 80 dUTPase. D95E mutant from dUTPase 80alpha phage.

5nz2, resolution 2.85Å

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