This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1gki

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
==PLASMID COUPLING PROTEIN TRWB IN COMPLEX WITH ADP AND MG2+.==
+
 
 +
==Plasmid coupling protein TrwB in complex with ADP and Mg2+.==
<StructureSection load='1gki' size='340' side='right' caption='[[1gki]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='1gki' size='340' side='right' caption='[[1gki]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1gki]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GKI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1gki]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1GKI FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1e9r|1e9r]], [[1e9s|1e9s]], [[1gl6|1gl6]], [[1gl7|1gl7]]</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1e9r|1e9r]], [[1e9s|1e9s]], [[1gl6|1gl6]], [[1gl7|1gl7]]</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gki OCA], [http://pdbe.org/1gki PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gki RCSB], [http://www.ebi.ac.uk/pdbsum/1gki PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gki OCA], [http://pdbe.org/1gki PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1gki RCSB], [http://www.ebi.ac.uk/pdbsum/1gki PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1gki ProSAT]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 15: Line 16:
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gki ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 30: Line 31:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
 
[[Category: Coll, M]]
[[Category: Coll, M]]
-
[[Category: Cruz, F De La]]
 
[[Category: Gomis-Ruth, F X]]
[[Category: Gomis-Ruth, F X]]
[[Category: Moncalian, G]]
[[Category: Moncalian, G]]
 +
[[Category: Cruz, F De La]]
[[Category: Bacterial conjugation]]
[[Category: Bacterial conjugation]]
[[Category: Coupling protein]]
[[Category: Coupling protein]]
[[Category: F1-atpase-like quaternary structure]]
[[Category: F1-atpase-like quaternary structure]]
[[Category: Ring helicase]]
[[Category: Ring helicase]]

Revision as of 04:35, 21 September 2017

Plasmid coupling protein TrwB in complex with ADP and Mg2+.

1gki, resolution 3.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools