This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1y02

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
|PDB= 1y02 |SIZE=350|CAPTION= <scene name='initialview01'>1y02</scene>, resolution 1.8&Aring;
|PDB= 1y02 |SIZE=350|CAPTION= <scene name='initialview01'>1y02</scene>, resolution 1.8&Aring;
|SITE=
|SITE=
-
|LIGAND= <scene name='pdbligand=ZN:ZINC ION'>ZN</scene>
+
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|ACTIVITY=
|ACTIVITY=
|GENE=
|GENE=
 +
|DOMAIN=
 +
|RELATEDENTRY=
 +
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y02 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y02 OCA], [http://www.ebi.ac.uk/pdbsum/1y02 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1y02 RCSB]</span>
}}
}}
Line 26: Line 29:
[[Category: Shiozaki, E N.]]
[[Category: Shiozaki, E N.]]
[[Category: Tibbetts, M D.]]
[[Category: Tibbetts, M D.]]
-
[[Category: ZN]]
 
[[Category: carp2]]
[[Category: carp2]]
[[Category: caspase regulation]]
[[Category: caspase regulation]]
Line 33: Line 35:
[[Category: zinc-binding module]]
[[Category: zinc-binding module]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:16:44 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:57:04 2008''

Revision as of 21:57, 30 March 2008


PDB ID 1y02

Drag the structure with the mouse to rotate
, resolution 1.8Å
Ligands:
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml



Crystal Structure of a FYVE-type domain from caspase regulator CARP2


Overview

The caspase-associated ring proteins (CARP1 and CARP2) are distinguished from other caspase regulators by the presence of a FYVE-type zinc finger domain. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function. Here, we report the crystal structure of the N-terminal region of CARP2 (44-139) including the FYVE-type domain and its associated helical bundle at 1.7 A resolution. The structure reveals a cramped phosphoinositide binding pocket and a blunted membrane insertion loop. These structural features indicate that the domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. The CARP2 FYVE-like domain thus defines a third subfamily of FYVE-type domains that are functionally and structurally distinct. Structural analyses provide insights into the possible function of this unique subfamily of FYVE-type domains.

About this Structure

1Y02 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Crystal structure of a FYVE-type zinc finger domain from the caspase regulator CARP2., Tibbetts MD, Shiozaki EN, Gu L, McDonald ER 3rd, El-Deiry WS, Shi Y, Structure. 2004 Dec;12(12):2257-63. PMID:15576038

Page seeded by OCA on Mon Mar 31 00:57:04 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools