1yqt
From Proteopedia
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|PDB= 1yqt |SIZE=350|CAPTION= <scene name='initialview01'>1yqt</scene>, resolution 1.9Å | |PDB= 1yqt |SIZE=350|CAPTION= <scene name='initialview01'>1yqt</scene>, resolution 1.9Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | + | |LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5'-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yqt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yqt OCA], [http://www.ebi.ac.uk/pdbsum/1yqt PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1yqt RCSB]</span> | ||
}} | }} | ||
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[[Category: Karcher, A.]] | [[Category: Karcher, A.]] | ||
[[Category: Martens, B.]] | [[Category: Martens, B.]] | ||
| - | [[Category: ADP]] | ||
| - | [[Category: MG]] | ||
[[Category: atp-binding cassette]] | [[Category: atp-binding cassette]] | ||
[[Category: ribosome biogenesis]] | [[Category: ribosome biogenesis]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:18:22 2008'' |
Revision as of 22:18, 30 March 2008
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| , resolution 1.9Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
RNase-L Inhibitor
Overview
The ABC ATPase RNase-L inhibitor (RLI) emerges as a key enzyme in ribosome biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. To help reveal the structural mechanism of RLI, we determined the Mg2+-ADP bound crystal structure of the twin cassette ATPase of P. furiosus RLI at 1.9 A resolution and analyzed functional motifs in yeast in vivo. RLI shows similarities but also differences to known ABC enzyme structures. Twin nucleotide binding domains (NBD1 and NBD2) are arranged to form two composite active sites in their interface cleft, indicating they undergo the ATP-driven clamp-like motion of the NBDs of ABC transporters. An unusual "hinge" domain along the NBD1:NBD2 interface provides a frame for association and possibly ATP-driven conformational changes of the NBDs. Our results establish a first structural basis for ABC domain heterodimers and suggest that RLI may act as mechanochemical enzyme in ribosome and HIV capsid biogenesis.
About this Structure
1YQT is a Single protein structure of sequence from Pyrococcus furiosus. Full crystallographic information is available from OCA.
Reference
X-ray structure of RLI, an essential twin cassette ABC ATPase involved in ribosome biogenesis and HIV capsid assembly., Karcher A, Buttner K, Martens B, Jansen RP, Hopfner KP, Structure. 2005 Apr;13(4):649-59. PMID:15837203
Page seeded by OCA on Mon Mar 31 01:18:22 2008
