User:Teresa Maria Carusone/Sandbox 1
From Proteopedia
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- | == '''Structural highlights''' | + | == '''Structural highlights''' <ref name="rasmol4"><ref>PMID:18486146</ref>== |
SsoPox is homodimeric, and the monomer is roughly globular. The SsoPox structure could be described as a distorted <scene name='77/770586/Alfa_beta_8_barrel/2'>(α/β)-8 barrel </scene>. The SsoPox active site consists of a cavity containing a <scene name='77/770586/Bi-nuclear_center/2'>bi-nuclear center</scene>, located at the C terminus of the β -barrel. These two metal cations are bridged by a putative catalytic <scene name='77/770586/Bi-nuclear_center/4'>water molecule</scene>, and by <scene name='77/770586/Lis_137_ok/2'>carboxylated lysine</scene> . As for the metal cation coordination, <scene name='77/770586/4_histidine/3'>four histidine residues </scene> are also involved, as well as <scene name='77/770586/Asp_256/1'>an aspartic acid (Asp256)</scene> and a <scene name='77/770586/Bi-nuclear_center/5'>second watermolecule</scene>. | SsoPox is homodimeric, and the monomer is roughly globular. The SsoPox structure could be described as a distorted <scene name='77/770586/Alfa_beta_8_barrel/2'>(α/β)-8 barrel </scene>. The SsoPox active site consists of a cavity containing a <scene name='77/770586/Bi-nuclear_center/2'>bi-nuclear center</scene>, located at the C terminus of the β -barrel. These two metal cations are bridged by a putative catalytic <scene name='77/770586/Bi-nuclear_center/4'>water molecule</scene>, and by <scene name='77/770586/Lis_137_ok/2'>carboxylated lysine</scene> . As for the metal cation coordination, <scene name='77/770586/4_histidine/3'>four histidine residues </scene> are also involved, as well as <scene name='77/770586/Asp_256/1'>an aspartic acid (Asp256)</scene> and a <scene name='77/770586/Bi-nuclear_center/5'>second watermolecule</scene>. | ||
The most deeply buried metal cation (called α) adopts a trigonal bipyramidal geometry, being bound by coordination bonds with <scene name='77/770586/Alfa_coordination/3'>with His22, His24, Asp256, Lys137 and the bridging water molecule</scene>. The most solvent exposed (called β ) has a distorted trigonal bipyramidal geometry, and is bound to <scene name='77/770586/Cation_beta/4'>His170, His199, Lys137, the bridging water molecule</scene> and the second water molecule. | The most deeply buried metal cation (called α) adopts a trigonal bipyramidal geometry, being bound by coordination bonds with <scene name='77/770586/Alfa_coordination/3'>with His22, His24, Asp256, Lys137 and the bridging water molecule</scene>. The most solvent exposed (called β ) has a distorted trigonal bipyramidal geometry, and is bound to <scene name='77/770586/Cation_beta/4'>His170, His199, Lys137, the bridging water molecule</scene> and the second water molecule. |
Revision as of 15:27, 24 October 2017
Phosphotriesterase-Like Lactonase (PLL)
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References
- ↑ 1.0 1.1 <ref>PMID: 15909078</li> <li id="cite_note-rasmol2-1">↑ <sup>[[#cite_ref-rasmol2_1-0|2.0]]</sup> <sup>[[#cite_ref-rasmol2_1-1|2.1]]</sup> <ref>PMID:17337320</li> <li id="cite_note-rasmol3-2">↑ <sup>[[#cite_ref-rasmol3_2-0|3.0]]</sup> <sup>[[#cite_ref-rasmol3_2-1|3.1]]</sup> <ref>PMID:17105187</li> <li id="cite_note-rasmol4-3">[[#cite_ref-rasmol4_3-0|↑]] <ref>PMID:18486146</li></ol></ref>