5opy
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of anti-alphaVbeta3 integrin Fab LM609== | |
+ | <StructureSection load='5opy' size='340' side='right' caption='[[5opy]], [[Resolution|resolution]] 2.26Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5opy]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OPY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5OPY FirstGlance]. <br> | ||
+ | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5opy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5opy OCA], [http://pdbe.org/5opy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5opy RCSB], [http://www.ebi.ac.uk/pdbsum/5opy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5opy ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The LM609 antibody specifically recognizes alphaVbeta3 integrin and inhibits angiogenesis, bone resorption, and viral infections in an arginine-glycine-aspartate-independent manner. LM609 entered phase II clinical trials for the treatment of several cancers and was also used for alphaVbeta3-targeted radioimmunotherapy. To elucidate the mechanisms of recognition and inhibition of alphaVbeta3 integrin, we solved the structure of the LM609 antigen-binding fragment by X-ray crystallography and determined its binding affinity for alphaVbeta3. Using single-particle electron microscopy, we show that LM609 binds at the interface between the beta-propeller domain of the alphaV chain and the betaI domain of the beta3 chain, near the RGD-binding site, of all observed integrin conformational states. Integrating these data with fluorescence size-exclusion chromatography, we demonstrate that LM609 sterically hinders access of large ligands to the RGD-binding pocket, without obstructing it. This work provides a structural framework to expedite future efforts utilizing LM609 as a diagnostic or therapeutic tool. | ||
- | + | The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alphaVbeta3 Integrin via Steric Hindrance.,Borst AJ, James ZM, Zagotta WN, Ginsberg M, Rey FA, DiMaio F, Backovic M, Veesler D Structure. 2017 Oct 7. pii: S0969-2126(17)30298-8. doi:, 10.1016/j.str.2017.09.007. PMID:29033288<ref>PMID:29033288</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | <div class="pdbe-citations 5opy" style="background-color:#fffaf0;"></div> | |
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Backovic, M]] | [[Category: Backovic, M]] | ||
- | [[Category: | + | [[Category: Borst, A J]] |
- | [[Category: | + | [[Category: DiMaio, F]] |
[[Category: Ginsberg, M]] | [[Category: Ginsberg, M]] | ||
- | [[Category: | + | [[Category: James, Z M]] |
- | [[Category: Rey, F | + | [[Category: Rey, F A]] |
- | [[Category: | + | [[Category: Veesler, D]] |
+ | [[Category: Zagotta, W]] | ||
+ | [[Category: Antigen-binding fragment]] | ||
+ | [[Category: Fab]] | ||
+ | [[Category: Immune system]] | ||
+ | [[Category: Lm609]] |
Revision as of 06:58, 25 October 2017
Crystal structure of anti-alphaVbeta3 integrin Fab LM609
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Categories: Backovic, M | Borst, A J | DiMaio, F | Ginsberg, M | James, Z M | Rey, F A | Veesler, D | Zagotta, W | Antigen-binding fragment | Fab | Immune system | Lm609