5h18

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5h18 is ON HOLD until Paper Publication
+
==Crystal structure of catalytic domain of UGGT (UDP-glucose-bound form) from Thermomyces dupontii==
 +
<StructureSection load='5h18' size='340' side='right' caption='[[5h18]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5h18]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_10518 Atcc 10518]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H18 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5H18 FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=UPG:URIDINE-5-DIPHOSPHATE-GLUCOSE'>UPG</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5h18 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h18 OCA], [http://pdbe.org/5h18 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5h18 RCSB], [http://www.ebi.ac.uk/pdbsum/5h18 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5h18 ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
In the endoplasmic reticulum (ER), a protein quality control system facilitates the efficient folding of newly synthesised proteins. In this system, a series of N-linked glycan intermediates displayed on the protein surface serve as quality tags. The ER folding-sensor enzyme UDP-glucose:glycoprotein glucosyltransferase (UGGT) acts as a gatekeeper in the ER quality control system by specifically catalysing monoglucosylation onto incompletely folded glycoproteins, thereby enabling them to interact with lectin-chaperone complexes. Here we characterise the dynamic structure of this enzyme. Our crystallographic data demonstrate that the sensor region is composed of four thioredoxin-like domains followed by a beta-rich domain, which are arranged into a C-shaped structure with a large central cavity, while the C-terminal catalytic domain undergoes a ligand-dependent conformational alteration. Furthermore, small-angle X-ray scattering, cryo-electron microscopy and high-speed atomic force microscopy have demonstrated that UGGT has a flexible modular structure in which the smaller catalytic domain is tethered to the larger folding-sensor region with variable spatial arrangements. These findings provide structural insights into the working mechanism whereby UGGT operates as a folding-sensor against a variety of glycoprotein substrates through its flexible modular structure possessing extended hydrophobic surfaces for the recognition of unfolded substrates.
-
Authors:
+
Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.,Satoh T, Song C, Zhu T, Toshimori T, Murata K, Hayashi Y, Kamikubo H, Uchihashi T, Kato K Sci Rep. 2017 Sep 22;7(1):12142. doi: 10.1038/s41598-017-12283-w. PMID:28939828<ref>PMID:28939828</ref>
-
Description:
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 5h18" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Atcc 10518]]
 +
[[Category: Kamikubo, H]]
 +
[[Category: Kato, K]]
 +
[[Category: Satoh, T]]
 +
[[Category: Toshimori, T]]
 +
[[Category: Uchihashi, T]]
 +
[[Category: Zhu, T]]
 +
[[Category: Endoplasmic reticulum]]
 +
[[Category: Folding sensor]]
 +
[[Category: Glucosyltransferase]]
 +
[[Category: Quality control]]
 +
[[Category: Transferase]]

Revision as of 06:17, 1 November 2017

Crystal structure of catalytic domain of UGGT (UDP-glucose-bound form) from Thermomyces dupontii

5h18, resolution 1.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools