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3hqr
From Proteopedia
(Difference between revisions)
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==PHD2:Mn:NOG:HIF1-alpha substrate complex== | ==PHD2:Mn:NOG:HIF1-alpha substrate complex== | ||
<StructureSection load='3hqr' size='340' side='right' caption='[[3hqr]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='3hqr' size='340' side='right' caption='[[3hqr]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3hqr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3hqr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HQR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HQR FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=OGA:N-OXALYLGLYCINE'>OGA</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=OGA:N-OXALYLGLYCINE'>OGA</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3hqu|3hqu]], [[2g1m|2g1m]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3hqu|3hqu]], [[2g1m|2g1m]]</td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PHD2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PHD2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hqr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hqr RCSB], [http://www.ebi.ac.uk/pdbsum/3hqr PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hqr OCA], [http://pdbe.org/3hqr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3hqr RCSB], [http://www.ebi.ac.uk/pdbsum/3hqr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3hqr ProSAT]</span></td></tr> |
</table> | </table> | ||
== Disease == | == Disease == | ||
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<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hqr ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 3hqr" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[ | + | *[[Molecular Playground/Prolyl Hydroxylase Domain (PHD) Enzyme|Molecular Playground/Prolyl Hydroxylase Domain (PHD) Enzyme]] |
| - | + | ||
| - | + | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Human]] |
[[Category: Chowdhury, R]] | [[Category: Chowdhury, R]] | ||
[[Category: McDonough, M A]] | [[Category: McDonough, M A]] | ||
[[Category: Schofield, C J]] | [[Category: Schofield, C J]] | ||
[[Category: Activator]] | [[Category: Activator]] | ||
| + | [[Category: Alternative splicing]] | ||
[[Category: Congenital erythrocytosis]] | [[Category: Congenital erythrocytosis]] | ||
| + | [[Category: Cytoplasm]] | ||
[[Category: Dioxygenase]] | [[Category: Dioxygenase]] | ||
[[Category: Disease mutation]] | [[Category: Disease mutation]] | ||
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[[Category: Oxidoreductase-transcription complex]] | [[Category: Oxidoreductase-transcription complex]] | ||
[[Category: Phosphoprotein]] | [[Category: Phosphoprotein]] | ||
| + | [[Category: Polymorphism]] | ||
[[Category: S-nitrosylation]] | [[Category: S-nitrosylation]] | ||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
| + | [[Category: Ubl conjugation]] | ||
[[Category: Vitamin c]] | [[Category: Vitamin c]] | ||
| + | [[Category: Zinc]] | ||
[[Category: Zinc-finger]] | [[Category: Zinc-finger]] | ||
Revision as of 07:44, 1 November 2017
PHD2:Mn:NOG:HIF1-alpha substrate complex
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Categories: Human | Chowdhury, R | McDonough, M A | Schofield, C J | Activator | Alternative splicing | Congenital erythrocytosis | Cytoplasm | Dioxygenase | Disease mutation | Dna-binding | Double stranded beta-helix | Hydroxylation | Iron | Isopeptide bond | Metal-binding | Nucleus | Oxidoreductase | Oxidoreductase-transcription complex | Phosphoprotein | Polymorphism | S-nitrosylation | Transcription | Transcription regulation | Ubl conjugation | Vitamin c | Zinc | Zinc-finger
