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5k8b
From Proteopedia
(Difference between revisions)
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<StructureSection load='5k8b' size='340' side='right' caption='[[5k8b]], [[Resolution|resolution]] 2.15Å' scene=''> | <StructureSection load='5k8b' size='340' side='right' caption='[[5k8b]], [[Resolution|resolution]] 2.15Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5k8b]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K8B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5K8B FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5k8b]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sheon Sheon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5K8B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5K8B FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PDG:N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC+ACID'>PDG</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PDG:N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-D-GLUTAMIC+ACID'>PDG</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5k8c|5k8c]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5k8c|5k8c]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">kdnA, SO_2476 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=211586 SHEON])</td></tr> | ||
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/8-amino-3,8-dideoxy-alpha-D-manno-octulosonate_transaminase 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.109 2.6.1.109] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/8-amino-3,8-dideoxy-alpha-D-manno-octulosonate_transaminase 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.109 2.6.1.109] </span></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5k8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k8b OCA], [http://pdbe.org/5k8b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5k8b RCSB], [http://www.ebi.ac.uk/pdbsum/5k8b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5k8b ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5k8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5k8b OCA], [http://pdbe.org/5k8b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5k8b RCSB], [http://www.ebi.ac.uk/pdbsum/5k8b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5k8b ProSAT]</span></td></tr> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase]] | [[Category: 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase]] | ||
| + | [[Category: Sheon]] | ||
[[Category: Holden, H M]] | [[Category: Holden, H M]] | ||
[[Category: Thoden, J B]] | [[Category: Thoden, J B]] | ||
Revision as of 18:09, 15 November 2017
X-ray structure of KdnA, 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase, from Shewanella oneidensis in the presence of the external aldimine with PLP and glutamate
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