5xar

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'''Unreleased structure'''
 
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The entry 5xar is ON HOLD until Paper Publication
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==Structural insights into the elevator-like mechanism of the sodium/citrate symporter CitS==
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<StructureSection load='5xar' size='340' side='right' caption='[[5xar]], [[Resolution|resolution]] 3.62&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5xar]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XAR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5XAR FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5x9r|5x9r]], [[5xas|5xas]], [[5xat|5xat]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">citS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5xar FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xar OCA], [http://pdbe.org/5xar PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xar RCSB], [http://www.ebi.ac.uk/pdbsum/5xar PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xar ProSAT]</span></td></tr>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/CITN_KLEPN CITN_KLEPN]] Uptake of citrate across the boundary membrane with the concomitant uptake of a sodium ion (symport system).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The sodium-dependent citrate transporter of Klebsiella pneumoniae (KpCitS) belongs to the 2-hydroxycarboxylate transporter (2-HCT) family and allows the cell to use citrate as sole carbon and energy source in anaerobic conditions. Here we present crystal structures of KpCitS in citrate-bound outward-facing, citrate-bound asymmetric, and citrate-free inward-facing state. The structures reveal that the KpCitS dimerization domain remains stationary throughout the transport cycle due to a hydrogen bond network as well as extensive hydrophobic interactions. In contrast, its transport domain undergoes a ~35 degrees rigid-body rotation and a ~17 A translocation perpendicular to the membrane to expose the substrate-binding site alternately to either side of the membrane. Furthermore, homology models of two other 2-HCT proteins based on the KpCitS structure offer structural insights into their differences in substrate specificity at a molecular level. On the basis of our results and previous biochemical data, we propose that the activity of the 2-HCT CitS involves an elevator-like movement in which the transport domain itself traverses the lipid bilayer, carrying the substrate into the cell in a sodium-dependent manner.
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Authors: Jin, M.S., Kim, J.W., Kim, S., Kim, S., Lee, H., Lee, J.-O.
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Structural insights into the elevator-like mechanism of the sodium/citrate symporter CitS.,Kim JW, Kim S, Kim S, Lee H, Lee JO, Jin MS Sci Rep. 2017 May 31;7(1):2548. doi: 10.1038/s41598-017-02794-x. PMID:28566738<ref>PMID:28566738</ref>
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Description: Structural insights into the elevator-like mechanism of the sodium/citrate symporter CitS
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Lee, H]]
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<div class="pdbe-citations 5xar" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Jin, M S]]
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[[Category: Kim, J W]]
[[Category: Kim, S]]
[[Category: Kim, S]]
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[[Category: Lee, J.-O]]
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[[Category: Lee, H]]
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[[Category: Kim, J.W]]
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[[Category: Lee, J O]]
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[[Category: Jin, M.S]]
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[[Category: 2-hct]]
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[[Category: Citrate transporter]]
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[[Category: Cit]]
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[[Category: Sodium/citrate symporter]]
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[[Category: Transport protein]]

Revision as of 10:10, 16 November 2017

Structural insights into the elevator-like mechanism of the sodium/citrate symporter CitS

5xar, resolution 3.62Å

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