5y69
From Proteopedia
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<StructureSection load='5y69' size='340' side='right' caption='[[5y69]], [[Resolution|resolution]] 1.85Å' scene=''> | <StructureSection load='5y69' size='340' side='right' caption='[[5y69]], [[Resolution|resolution]] 1.85Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5y69]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y69 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Y69 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5y69]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes_j0161 Listeria monocytogenes j0161]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y69 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Y69 FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LMOG_03146 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=393130 Listeria monocytogenes J0161])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5y69 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y69 OCA], [http://pdbe.org/5y69 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y69 RCSB], [http://www.ebi.ac.uk/pdbsum/5y69 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y69 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5y69 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y69 OCA], [http://pdbe.org/5y69 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y69 RCSB], [http://www.ebi.ac.uk/pdbsum/5y69 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y69 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Clustered regularly interspaced short palindromic repeats (CRISPRs) and CRISPR-associated (Cas) proteins provide bacteria with RNA-based adaptive immunity against phage infection. To counteract this defense mechanism, phages evolved anti-CRISPR (Acr) proteins that inactivate the CRISPR-Cas systems. AcrIIA1, encoded by Listeria monocytogenes prophages, is the most prevalent among the Acr proteins targeting type II-A CRISPR-Cas systems and has been used as a marker to identify other Acr proteins. Here, we report the crystal structure of AcrIIA1 and its RNA-binding affinity. AcrIIA1 forms a dimer with a novel two helical-domain architecture. The N-terminal domain of AcrIIA1 exhibits a helix-turn-helix motif similar to transcriptional factors. When overexpressed in Escherichia coli, AcrIIA1 associates with RNAs, suggesting that AcrIIA1 functions via nucleic acid recognition. Taken together, the unique structural and functional features of AcrIIA1 suggest its distinct mode of Acr activity, expanding the diversity of the inhibitory mechanisms employed by Acr proteins. | ||
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| + | Crystal structure of an anti-CRISPR protein, AcrIIA1.,Ka D, An SY, Suh JY, Bae E Nucleic Acids Res. 2017 Nov 22. pii: 4647678. doi: 10.1093/nar/gkx1181. PMID:29182776<ref>PMID:29182776</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 5y69" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Listeria monocytogenes j0161]] | ||
[[Category: An, S Y]] | [[Category: An, S Y]] | ||
[[Category: Bae, E]] | [[Category: Bae, E]] | ||
Revision as of 07:37, 13 December 2017
Crystal structure of the L52M mutant of AcrIIA1
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