5yvm
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal Structure of ADH/D1, an archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase== | |
| + | <StructureSection load='5yvm' size='340' side='right' caption='[[5yvm]], [[Resolution|resolution]] 2.12Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[5yvm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YVM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YVM FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NZQ:5,6-DIHYDROXY-NADP'>NZQ</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yvm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yvm OCA], [http://pdbe.org/5yvm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yvm RCSB], [http://www.ebi.ac.uk/pdbsum/5yvm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yvm ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Because only 0.01% of prokaryotic genospecies can be cultured and in situ observations are often impracticable, culture-independent methods are required to understand microbial life and harness potential applications of microbes. Here, we report a methodology for the production of proteins with desired functions based on single amplified genomes (SAGs) from unculturable species. We use this method to resurrect an alcohol dehydrogenase (ADH/D1) from an uncharacterized halo-thermophilic archaeon collected from a brine pool at the bottom of the Red Sea. Our crystal structure of 5,6-dihydroxy NADPH-bound ADH/D1 combined with biochemical analyses reveal the molecular features of its halo-thermophily, its unique habitat adaptations, and its possible reaction mechanism for atypical oxygen activation. Our strategy offers a general guide for using SAGs as a source for scientific and industrial investigations of "microbial dark matter." | ||
| - | + | Identification and Experimental Characterization of an Extremophilic Brine Pool Alcohol Dehydrogenase from Single Amplified Genomes.,Grotzinger SW, Karan R, Strillinger E, Bader S, Frank A, Al Rowaihi IS, Akal A, Wackerow W, Archer JA, Rueping M, Weuster-Botz D, Groll M, Eppinger J, Arold ST ACS Chem Biol. 2017 Dec 18. doi: 10.1021/acschembio.7b00792. PMID:29188989<ref>PMID:29188989</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 5yvm" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Arold, S T]] | ||
| + | [[Category: Eppinger, J]] | ||
[[Category: Frank, A]] | [[Category: Frank, A]] | ||
| - | [[Category: Strillinger, E]] | ||
[[Category: Groll, M]] | [[Category: Groll, M]] | ||
| - | [[Category: | + | [[Category: Grotzinger, S W]] |
| - | [[Category: | + | [[Category: Strillinger, E]] |
| - | [[Category: | + | [[Category: Dehydrogenase]] |
| + | [[Category: Halophilic]] | ||
| + | [[Category: Nzq]] | ||
| + | [[Category: Oxidoreductase]] | ||
| + | [[Category: Protein-cofactor complex]] | ||
| + | [[Category: Thermophilic]] | ||
Revision as of 08:35, 27 December 2017
Crystal Structure of ADH/D1, an archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase
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