This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ddg
From Proteopedia
| Line 4: | Line 4: | ||
|PDB= 2ddg |SIZE=350|CAPTION= <scene name='initialview01'>2ddg</scene>, resolution 2.1Å | |PDB= 2ddg |SIZE=350|CAPTION= <scene name='initialview01'>2ddg</scene>, resolution 2.1Å | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=2HP:DIHYDROGENPHOSPHATE+ION'>2HP</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=DA:2'-DEOXYADENOSINE-5'-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5'-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORP:2-DEOXY-5-PHOSPHONO-RIBOSE'>ORP</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= ttUDGB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus]) | |GENE= ttUDGB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus]) | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[2d3y|2D3Y]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ddg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ddg OCA], [http://www.ebi.ac.uk/pdbsum/2ddg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ddg RCSB]</span> | ||
}} | }} | ||
| Line 22: | Line 25: | ||
[[Category: Nakagawa, N.]] | [[Category: Nakagawa, N.]] | ||
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]] | [[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]] | ||
| - | [[Category: 2HP]] | ||
| - | [[Category: ACT]] | ||
| - | [[Category: EOH]] | ||
| - | [[Category: GOL]] | ||
| - | [[Category: SF4]] | ||
[[Category: base excision repair]] | [[Category: base excision repair]] | ||
[[Category: dna complex]] | [[Category: dna complex]] | ||
| Line 38: | Line 36: | ||
[[Category: uracil-dna glycosylase]] | [[Category: uracil-dna glycosylase]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:33:14 2008'' |
Revision as of 23:33, 30 March 2008
| |||||||
| , resolution 2.1Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , , , , , , , , | ||||||
| Gene: | ttUDGB (Thermus thermophilus) | ||||||
| Related: | 2D3Y
| ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal structure of uracil-DNA glycosylase in complex with AP:G containing DNA
About this Structure
2DDG is a Single protein structure of sequence from Thermus thermophilus. Full crystallographic information is available from OCA.
Page seeded by OCA on Mon Mar 31 02:33:14 2008
Categories: Single protein | Thermus thermophilus | Hoseki, J. | Kosaka, H. | Kuramitsu, S. | Masui, R. | Nakagawa, N. | RSGI, RIKEN Structural Genomics/Proteomics Initiative. | Base excision repair | Dna complex | Iron/sulfer cluster | National project on protein structural and functional analyse | Nppsfa | Riken structural genomics/proteomics initiative | Rsgi | Structural genomic | Thermophile | Uracil-dna glycosylase
