5yl3
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of horse heart myoglobin reconstituted with manganese porphycene in resting state at pH 8.5== | |
+ | <StructureSection load='5yl3' size='340' side='right' caption='[[5yl3]], [[Resolution|resolution]] 1.50Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[5yl3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YL3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YL3 FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HNN:PORPHYCENE+CONTAINING+MN'>HNN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5yl3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yl3 OCA], [http://pdbe.org/5yl3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5yl3 RCSB], [http://www.ebi.ac.uk/pdbsum/5yl3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5yl3 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/MYG_HORSE MYG_HORSE]] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | A mechanistic study of H2O2-dependent C-H bond hydroxylation by myoglobin reconstituted with a manganese porphycene was carried out. The X-ray crystal structure of the reconstituted protein obtained at 1.5 A resolution reveals tight incorporation of the complex into the myoglobin matrix at pH 8.5, the optimized pH value for the highest turnover number of hydroxylation of ethylbenzene. The protein generates a spectroscopically detectable two-electron oxidative intermediate in a reaction with peracid, which has a half-life up to 38 s at 10 degrees C. Electron paramagnetic resonance spectra of the intermediate with perpendicular and parallel modes are silent, indicating formation of a low-spin Mn(V)-oxo species. In addition, the Mn(V)-oxo species is capable of promoting the hydroxylation of sodium 4-ethylbenzenesulfonate under single turnover conditions with an apparent second-order rate constant of 2.0 M(-1) s(-1) at 25 degrees C. Furthermore, the higher bond dissociation enthalpy of the substrate decreases the rate constant, in support of the proposal that the H-abstraction is one of the rate-limiting steps. The present engineered myoglobin serves as an artificial metalloenzyme for inert C-H bond activation via a high-valent metal species similar to the species employed by native monooxygenases such as cytochrome P450. | ||
- | + | Manganese(V) Porphycene Complex Responsible for Inert C-H Bond Hydroxylation in a Myoglobin Matrix.,Oohora K, Meichin H, Kihira Y, Sugimoto H, Shiro Y, Hayashi T J Am Chem Soc. 2017 Dec 14. doi: 10.1021/jacs.7b11288. PMID:29237270<ref>PMID:29237270</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 5yl3" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Equus caballus]] | ||
+ | [[Category: Hayashi, T]] | ||
+ | [[Category: Kihira, Y]] | ||
+ | [[Category: Meichin, H]] | ||
+ | [[Category: Oohora, K]] | ||
+ | [[Category: Shiro, Y]] | ||
+ | [[Category: Sugimoto, H]] | ||
+ | [[Category: Globin fold]] | ||
+ | [[Category: Muscle]] | ||
+ | [[Category: Oxygen storage]] | ||
+ | [[Category: Oxygen transport]] |
Revision as of 08:20, 17 January 2018
Crystal structure of horse heart myoglobin reconstituted with manganese porphycene in resting state at pH 8.5
|
Categories: Equus caballus | Hayashi, T | Kihira, Y | Meichin, H | Oohora, K | Shiro, Y | Sugimoto, H | Globin fold | Muscle | Oxygen storage | Oxygen transport