2cdm
From Proteopedia
(Difference between revisions)
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| - | == | + | |
| + | ==The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site== | ||
<StructureSection load='2cdm' size='340' side='right' caption='[[2cdm]], [[Resolution|resolution]] 2.70Å' scene=''> | <StructureSection load='2cdm' size='340' side='right' caption='[[2cdm]], [[Resolution|resolution]] 2.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1omh|1omh]], [[1osb|1osb]], [[1qx0|1qx0]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1omh|1omh]], [[1osb|1osb]], [[1qx0|1qx0]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cdm OCA], [http://pdbe.org/2cdm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cdm RCSB], [http://www.ebi.ac.uk/pdbsum/2cdm PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cdm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cdm OCA], [http://pdbe.org/2cdm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cdm RCSB], [http://www.ebi.ac.uk/pdbsum/2cdm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2cdm ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/2cdm_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/2cdm_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cdm ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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[[Category: Boer, R]] | [[Category: Boer, R]] | ||
[[Category: Coll, M]] | [[Category: Coll, M]] | ||
| - | [[Category: Cruz, F | + | [[Category: Cruz, F de la]] |
[[Category: Guasch, A]] | [[Category: Guasch, A]] | ||
[[Category: Lucas, M]] | [[Category: Lucas, M]] | ||
Revision as of 18:47, 24 January 2018
The structure of TrwC complexed with a 27-mer DNA comprising the recognition hairpin and the cleavage site
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