This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1m8v
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer== | ==Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer== | ||
<StructureSection load='1m8v' size='340' side='right' caption='[[1m8v]], [[Resolution|resolution]] 2.60Å' scene=''> | <StructureSection load='1m8v' size='340' side='right' caption='[[1m8v]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
| Line 4: | Line 5: | ||
<table><tr><td colspan='2'>[[1m8v]] is a 21 chain structure with sequence from [http://en.wikipedia.org/wiki/"pyrococcus_abyssi"_erauso_et_al._1993 "pyrococcus abyssi" erauso et al. 1993]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M8V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M8V FirstGlance]. <br> | <table><tr><td colspan='2'>[[1m8v]] is a 21 chain structure with sequence from [http://en.wikipedia.org/wiki/"pyrococcus_abyssi"_erauso_et_al._1993 "pyrococcus abyssi" erauso et al. 1993]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M8V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M8V FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m8v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m8v OCA], [http://pdbe.org/1m8v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1m8v RCSB], [http://www.ebi.ac.uk/pdbsum/1m8v PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m8v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m8v OCA], [http://pdbe.org/1m8v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1m8v RCSB], [http://www.ebi.ac.uk/pdbsum/1m8v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1m8v ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 10: | Line 11: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m8/1m8v_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m8/1m8v_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 25: | Line 26: | ||
</div> | </div> | ||
<div class="pdbe-citations 1m8v" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 1m8v" style="background-color:#fffaf0;"></div> | ||
| - | |||
| - | ==See Also== | ||
| - | *[[Sm-like protein|Sm-like protein]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 06:24, 31 January 2018
Structure of Pyrococcus abyssii Sm Protein in Complex with a Uridine Heptamer
| |||||||||||
