This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
6c0c
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='6c0c' size='340' side='right' caption='[[6c0c]], [[Resolution|resolution]] 1.51Å' scene=''> | <StructureSection load='6c0c' size='340' side='right' caption='[[6c0c]], [[Resolution|resolution]] 1.51Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[6c0c]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6C0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6C0C FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6c0c]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"streptococcus_casseliflavus"_vaughan_et_al._1979 "streptococcus casseliflavus" vaughan et al. 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6C0C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6C0C FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDS:(2S)-4-amino-N-[(1R,2S,3S,4R,5S)-5-amino-4-{[(2S,3R)-3-amino-6-{[(2-hydroxyethyl)amino]methyl}-3,4-dihydro-2H-pyran-2-yl]oxy}-2-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-3-hydroxycyclohexyl]-2-hydroxybutanamide'>EDS</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDS:(2S)-4-amino-N-[(1R,2S,3S,4R,5S)-5-amino-4-{[(2S,3R)-3-amino-6-{[(2-hydroxyethyl)amino]methyl}-3,4-dihydro-2H-pyran-2-yl]oxy}-2-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-3-hydroxycyclohexyl]-2-hydroxybutanamide'>EDS</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4dfb|4dfb]], [[4dbx|4dbx]], [[4de4|4de4]], [[4dfu|4dfu]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4dfb|4dfb]], [[4dbx|4dbx]], [[4de4|4de4]], [[4dfu|4dfu]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aph(2'')-Id ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=37734 "Streptococcus casseliflavus" Vaughan et al. 1979])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6c0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6c0c OCA], [http://pdbe.org/6c0c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6c0c RCSB], [http://www.ebi.ac.uk/pdbsum/6c0c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6c0c ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6c0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6c0c OCA], [http://pdbe.org/6c0c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6c0c RCSB], [http://www.ebi.ac.uk/pdbsum/6c0c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6c0c ProSAT]</span></td></tr> | ||
</table> | </table> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Streptococcus casseliflavus vaughan et al. 1979]] | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
[[Category: Dong, A]] | [[Category: Dong, A]] | ||
Revision as of 07:07, 15 February 2018
Crystal structure of APH(2")-IVa in complex with plazomicin
| |||||||||||
Categories: Streptococcus casseliflavus vaughan et al. 1979 | Structural genomic | Dong, A | Evdokimova, E | Joachimiak, J | Leo, R Di | Satchell, K J | Savchenko, A | Stogios, P J | Aminoglycoside | Aminoglycoside phosphotransferase | Antibiotic | Csgid | Eukaryotic protein kinase-like fold | Kinase | Plazomicin | Transferase | Transferase-antibiotic complex
