This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1p9j

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
 +
==Solution structure and dynamics of the EGF/TGF-alpha chimera T1E==
==Solution structure and dynamics of the EGF/TGF-alpha chimera T1E==
<StructureSection load='1p9j' size='340' side='right' caption='[[1p9j]], [[NMR_Ensembles_of_Models | 36 NMR models]]' scene=''>
<StructureSection load='1p9j' size='340' side='right' caption='[[1p9j]], [[NMR_Ensembles_of_Models | 36 NMR models]]' scene=''>
Line 4: Line 5:
<table><tr><td colspan='2'>[[1p9j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P9J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1P9J FirstGlance]. <br>
<table><tr><td colspan='2'>[[1p9j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P9J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1P9J FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TGF-alpha and EGF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TGF-alpha and EGF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1p9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p9j OCA], [http://pdbe.org/1p9j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1p9j RCSB], [http://www.ebi.ac.uk/pdbsum/1p9j PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1p9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p9j OCA], [http://pdbe.org/1p9j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1p9j RCSB], [http://www.ebi.ac.uk/pdbsum/1p9j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1p9j ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
Line 12: Line 13:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/1p9j_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/1p9j_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1p9j ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 27: Line 28:
</div>
</div>
<div class="pdbe-citations 1p9j" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1p9j" style="background-color:#fffaf0;"></div>
- 
-
==See Also==
 
-
*[[Epidermal growth factor|Epidermal growth factor]]
 
== References ==
== References ==
<references/>
<references/>

Revision as of 07:38, 15 February 2018

Solution structure and dynamics of the EGF/TGF-alpha chimera T1E

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools