Sandbox Reserved 1392

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
{{Sandbox_Reserved_HLSC322}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
{{Sandbox_Reserved_HLSC322}}<!-- PLEASE ADD YOUR CONTENT BELOW HERE -->
-
==DNA Structure==
+
==Human E-cadherin Protein==
<StructureSection load='1bna' size='340' side='right' caption='Caption for this structure' scene=''>
<StructureSection load='1bna' size='340' side='right' caption='Caption for this structure' scene=''>
This is a default text for your page ''''''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
This is a default text for your page ''''''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
Line 6: Line 6:
== Function ==
== Function ==
 +
Epithelial-cadherin (1-213), or E-cadherin, is a calcium-dependent cell adhesion protein. E-cadherin help regulate bacterial interaction with mammalian tissues and play a key role in blastula formation.
== Disease ==
== Disease ==
 +
E-cadherin is a tumor suppressor gene. Degradation or loss of function of the gene is thought to be linked to metastasis and proliferation of tumors. In particular, mutations in the E-cadherin gene are linked to a series of cancers, including gastric, breast, colorectal, ovarian, and thyroid cancers.
== Relevance ==
== Relevance ==
== Structural highlights ==
== Structural highlights ==
-
DNA is made up of <scene name='77/777712/Base_pairs_of_dna/1'>[[base pairs]</scene>].
+
E-cadherin is 213 amino acids long. The molecule is comprised of five cadherin extensions, a transmembrane region, and a cytoplasmic tail. In epithelial cells, E-cadherin contains cell-to-cell junctions often located close to actin-filaments within the cytoskeleton of a cell. E-cadherin is a homodimer, meaning that it is made up of two identical subunits.
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
Line 19: Line 21:
</StructureSection>
</StructureSection>
== References ==
== References ==
-
<references/>
+
https://www.ebi.ac.uk/pdbe/entry/pdb/2o72/
 +
http://www.uniprot.org/uniprot/P12830
 +
https://en.wikipedia.org/wiki/CDH1_(gene)

Revision as of 21:41, 22 February 2018

This Sandbox is Reserved from January through July 31, 2018 for use in the course HLSC322: Principles of Genetics and Genomics taught by Genevieve Houston-Ludlam at the University of Maryland, College Park, USA. This reservation includes Sandbox Reserved 1311 through Sandbox Reserved 1430.
To get started:
  • Click the edit this page tab at the top. Save the page after each step, then edit it again.
  • Click the 3D button (when editing, above the wikitext box) to insert Jmol.
  • show the Scene authoring tools, create a molecular scene, and save it. Copy the green link into the page.
  • Add a description of your scene. Use the buttons above the wikitext box for bold, italics, links, headlines, etc.

More help: Help:Editing

Human E-cadherin Protein

Caption for this structure

Drag the structure with the mouse to rotate

References

https://www.ebi.ac.uk/pdbe/entry/pdb/2o72/ http://www.uniprot.org/uniprot/P12830 https://en.wikipedia.org/wiki/CDH1_(gene)

Personal tools