1rzg
From Proteopedia
(Difference between revisions)
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==Crystal structure of Human anti-HIV-1 GP120 reactive antibody 412d== | ==Crystal structure of Human anti-HIV-1 GP120 reactive antibody 412d== | ||
<StructureSection load='1rzg' size='340' side='right' caption='[[1rzg]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='1rzg' size='340' side='right' caption='[[1rzg]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1rzg]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RZG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RZG FirstGlance]. <br> | <table><tr><td colspan='2'>[[1rzg]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RZG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1RZG FirstGlance]. <br> | ||
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=SUC:SUCROSE'>SUC</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=CYS:CYSTEINE'>CYS</scene>, <scene name='pdbligand=SUC:SUCROSE'>SUC</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TYS:O-SULFO-L-TYROSINE'>TYS</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=TYS:O-SULFO-L-TYROSINE'>TYS</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1rz7|1rz7]], [[1rz8|1rz8]], [[1rzf|1rzf]], [[1rzi|1rzi]], [[1rzj|1rzj]], [[1rzk|1rzk]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1rz7|1rz7]], [[1rz8|1rz8]], [[1rzf|1rzf]], [[1rzi|1rzi]], [[1rzj|1rzj]], [[1rzk|1rzk]]</td></tr> | ||
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rzg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rzg OCA], [http://pdbe.org/1rzg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rzg RCSB], [http://www.ebi.ac.uk/pdbsum/1rzg PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rzg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rzg OCA], [http://pdbe.org/1rzg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1rzg RCSB], [http://www.ebi.ac.uk/pdbsum/1rzg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1rzg ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rz/1rzg_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rz/1rzg_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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==See Also== | ==See Also== | ||
- | *[[Antibody|Antibody]] | + | *[[Antibody 3D structures|Antibody 3D structures]] |
== References == | == References == | ||
<references/> | <references/> |
Revision as of 06:54, 8 March 2018
Crystal structure of Human anti-HIV-1 GP120 reactive antibody 412d
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Categories: Human | Choe, H | Dimitrov, D S | Farzan, M | Hendrickson, W A | Huang, C C | Kwong, P D | Majeed, S | Moore, M J | Phogat, S | Robinson, J | Sodroski, J | Venturi, M | Wyatt, R | Zhang, M Y | Antibody | Cd4i | Gp120 | Hiv-1 | Immune system | Tyrosine sulfation | Vh-gene usage