6any
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==Structure of BmVAL-1== | |
+ | <StructureSection load='6any' size='340' side='right' caption='[[6any]], [[Resolution|resolution]] 2.25Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6any]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ANY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6ANY FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6any FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6any OCA], [http://pdbe.org/6any PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6any RCSB], [http://www.ebi.ac.uk/pdbsum/6any PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6any ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Brugia malayi is a causative agent of lymphatic filariasis, a major tropical disease. The infective L3 parasite stage releases immunomodulatory proteins including the venom allergen-like proteins (VALs), which are members of the SCP/TAPS (Sperm-coating protein/Tpx/antigen 5/pathogenesis related-1/Sc7) superfamily. BmVAL-1 is a major target of host immunity with >90% of infected B. malayi microfilaraemic cases being seropositive for antibodies to BmVAL-1. This study is part of ongoing efforts to characterize the structures and functions of important B. malayi proteins. Recombinant BmVAL-1 was produced using a plant expression system, crystallized and the structure was solved by molecular replacement and refined to 2.1A, revealing the characteristic alpha/beta/alpha sandwich topology of eukaryotic SCP/TAPS proteins. The protein has more than 45% loop regions and these flexible loops connect the helices and strands, which are longer than predicted based on other parasite SCP/TAPS protein structures. The large central cavity of BmVAL-1 is a prototypical CRISP cavity with two histidines required to bind divalent cations. The caveolin-binding motif (CBM) that mediates sterol binding in SCP/TAPS proteins is large and open in BmVAL-1 and is N-glycosylated. N-glycosylation of the CBM does not affect the ability of BmVAL-1 to bind sterol in vitro. BmVAL-1 complements the in vivo sterol export phenotype of yeast mutants lacking their endogenous SCP/TAPS proteins. The in vitro sterol-binding affinity of BmVAL-1 is comparable with Pry1, a yeast sterol transporting SCP/TAPS protein. Sterol binding of BmVAL-1 is dependent on divalent cations. BmVAL-1 also has a large open palmitate-binding cavity, which binds palmitate comparably to tablysin-15, a lipid-binding SCP/TAPS protein. The central cavity, CBM and palmitate-binding cavity of BmVAL-1 are interconnected within the monomer with channels that can serve as pathways for water molecules, cations and small molecules. | ||
- | + | Crystal structure of Brugia malayi venom allergen-like protein-1 (BmVAL-1), a vaccine candidate for lymphatic filariasis.,Darwiche R, Lugo F, Drurey C, Varossieau K, Smant G, Wilbers RHP, Maizels RM, Schneiter R, Asojo OA Int J Parasitol. 2018 Mar 6. pii: S0020-7519(18)30041-9. doi:, 10.1016/j.ijpara.2017.12.003. PMID:29501266<ref>PMID:29501266</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 6any" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Asojo, O A]] | ||
+ | [[Category: Ag5]] | ||
+ | [[Category: Ancylostoma secreted protein]] | ||
+ | [[Category: Antigen 5]] | ||
+ | [[Category: Asp]] | ||
+ | [[Category: Cap]] | ||
+ | [[Category: Crisp]] | ||
+ | [[Category: Cysteine-rich secretory protein]] | ||
+ | [[Category: Excretory-secretory product]] | ||
+ | [[Category: Lipid transport]] | ||
+ | [[Category: Pathogenesis related-1]] | ||
+ | [[Category: Pr-1]] | ||
+ | [[Category: Sc7]] | ||
+ | [[Category: Scp]] | ||
+ | [[Category: Sperm coating protein]] | ||
+ | [[Category: Sterol binding]] | ||
+ | [[Category: Tap]] | ||
+ | [[Category: Testis specific protein]] | ||
+ | [[Category: Tpx]] | ||
+ | [[Category: Val]] | ||
+ | [[Category: Venom allergen-like]] | ||
+ | [[Category: Venom antigen 5]] |
Revision as of 06:36, 28 March 2018
Structure of BmVAL-1
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Categories: Asojo, O A | Ag5 | Ancylostoma secreted protein | Antigen 5 | Asp | Cap | Crisp | Cysteine-rich secretory protein | Excretory-secretory product | Lipid transport | Pathogenesis related-1 | Pr-1 | Sc7 | Scp | Sperm coating protein | Sterol binding | Tap | Testis specific protein | Tpx | Val | Venom allergen-like | Venom antigen 5