This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1vdw
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==A hypothetical protein PH1897 from Pyrococcus horikoshii with similarities for Inositol-1 monophosphatase== | ==A hypothetical protein PH1897 from Pyrococcus horikoshii with similarities for Inositol-1 monophosphatase== | ||
<StructureSection load='1vdw' size='340' side='right' caption='[[1vdw]], [[Resolution|resolution]] 1.30Å' scene=''> | <StructureSection load='1vdw' size='340' side='right' caption='[[1vdw]], [[Resolution|resolution]] 1.30Å' scene=''> | ||
| Line 4: | Line 5: | ||
<table><tr><td colspan='2'>[[1vdw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VDW FirstGlance]. <br> | <table><tr><td colspan='2'>[[1vdw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VDW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VDW FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdw OCA], [http://pdbe.org/1vdw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vdw RCSB], [http://www.ebi.ac.uk/pdbsum/1vdw PDBsum], [http://www.topsan.org/Proteins/RSGI/1vdw TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vdw OCA], [http://pdbe.org/1vdw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1vdw RCSB], [http://www.ebi.ac.uk/pdbsum/1vdw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1vdw ProSAT], [http://www.topsan.org/Proteins/RSGI/1vdw TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 10: | Line 11: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdw_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vd/1vdw_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
Revision as of 07:14, 4 April 2018
A hypothetical protein PH1897 from Pyrococcus horikoshii with similarities for Inositol-1 monophosphatase
| |||||||||||
