1v9j

From Proteopedia

(Difference between revisions)

Revision as of 07:49, 4 April 2018

Solution structure of a BolA-like protein from Mus musculus

Structural highlights

1v9j is a 1 chain structure with sequence from Lk3 transgenic mice. This structure supersedes the now removed PDB entry 1iw5. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The BolA-like proteins are widely conserved from prokaryotes to eukaryotes. The BolA-like proteins seem to be involved in cell proliferation or cell-cycle regulation, but the molecular function is still unknown. Here we determined the structure of a mouse BolA-like protein. The overall topology is alphabetabetaalphaalphabetaalpha, in which beta(1) and beta(2) are antiparallel, and beta(3) is parallel to beta(2). This fold is similar to the class II KH fold, except for the absence of the GXXG loop, which is well conserved in the KH fold. The conserved residues in the BolA-like proteins are assembled on the one side of the protein.

Solution structure of a BolA-like protein from Mus musculus.,Kasai T, Inoue M, Koshiba S, Yabuki T, Aoki M, Nunokawa E, Seki E, Matsuda T, Matsuda N, Tomo Y, Shirouzu M, Terada T, Obayashi N, Hamana H, Shinya N, Tatsuguchi A, Yasuda S, Yoshida M, Hirota H, Matsuo Y, Tani K, Suzuki H, Arakawa T, Carninci P, Kawai J, Hayashizaki Y, Kigawa T, Yokoyama S Protein Sci. 2004 Feb;13(2):545-8. Epub 2004 Jan 10. PMID:14718656^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Kasai T, Inoue M, Koshiba S, Yabuki T, Aoki M, Nunokawa E, Seki E, Matsuda T, Matsuda N, Tomo Y, Shirouzu M, Terada T, Obayashi N, Hamana H, Shinya N, Tatsuguchi A, Yasuda S, Yoshida M, Hirota H, Matsuo Y, Tani K, Suzuki H, Arakawa T, Carninci P, Kawai J, Hayashizaki Y, Kigawa T, Yokoyama S. Solution structure of a BolA-like protein from Mus musculus. Protein Sci. 2004 Feb;13(2):545-8. Epub 2004 Jan 10. PMID:14718656 doi:10.1110/ps.03401004

1 Structural highlights
2 Evolutionary Conservation
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1v9j"

@@ Line 1: / Line 1: @@
 ==Solution structure of a BolA-like protein from Mus musculus==
 <StructureSection load='1v9j' size='340' side='right' caption='[[1v9j]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
 == Structural highlights ==
 <table><tr><td colspan='2'>[[1v9j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1iw5 1iw5]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V9J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V9J FirstGlance]. <br>
-</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v9j OCA], [http://pdbe.org/1v9j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v9j RCSB], [http://www.ebi.ac.uk/pdbsum/1v9j PDBsum], [http://www.topsan.org/Proteins/RSGI/1v9j TOPSAN]</span></td></tr>
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v9j OCA], [http://pdbe.org/1v9j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v9j RCSB], [http://www.ebi.ac.uk/pdbsum/1v9j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1v9j ProSAT], [http://www.topsan.org/Proteins/RSGI/1v9j TOPSAN]</span></td></tr>
 </table>
 == Evolutionary Conservation ==
@@ Line 9: / Line 10: @@
 Check<jmol>
   <jmolCheckbox>
-    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v9/1v9j_consurf.spt"</scriptWhenChecked>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v9/1v9j_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>

1v9j

From Proteopedia

Revision as of 07:49, 4 April 2018

Solution structure of a BolA-like protein from Mus musculus

Structural highlights

Evolutionary Conservation

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

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