This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1wst
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==Crystal structure of multiple substrate aminotransferase (MsAT) from Thermococcus profundus== | ==Crystal structure of multiple substrate aminotransferase (MsAT) from Thermococcus profundus== | ||
<StructureSection load='1wst' size='340' side='right' caption='[[1wst]], [[Resolution|resolution]] 1.95Å' scene=''> | <StructureSection load='1wst' size='340' side='right' caption='[[1wst]], [[Resolution|resolution]] 1.95Å' scene=''> | ||
| Line 4: | Line 5: | ||
<table><tr><td colspan='2'>[[1wst]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_51592 Atcc 51592]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WST OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WST FirstGlance]. <br> | <table><tr><td colspan='2'>[[1wst]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_51592 Atcc 51592]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WST OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1WST FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wst FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wst OCA], [http://pdbe.org/1wst PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wst RCSB], [http://www.ebi.ac.uk/pdbsum/1wst PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1wst FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wst OCA], [http://pdbe.org/1wst PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1wst RCSB], [http://www.ebi.ac.uk/pdbsum/1wst PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1wst ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 10: | Line 11: | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ws/1wst_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ws/1wst_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wst ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
Revision as of 16:38, 11 April 2018
Crystal structure of multiple substrate aminotransferase (MsAT) from Thermococcus profundus
| |||||||||||

