This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ydf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
 +
==Crystal structure of a HAD-like phosphatase from Streptococcus pneumoniae==
==Crystal structure of a HAD-like phosphatase from Streptococcus pneumoniae==
<StructureSection load='1ydf' size='340' side='right' caption='[[1ydf]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='1ydf' size='340' side='right' caption='[[1ydf]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
Line 4: Line 5:
<table><tr><td colspan='2'>[[1ydf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strpn Strpn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YDF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YDF FirstGlance]. <br>
<table><tr><td colspan='2'>[[1ydf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Strpn Strpn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YDF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YDF FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ydf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ydf OCA], [http://pdbe.org/1ydf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ydf RCSB], [http://www.ebi.ac.uk/pdbsum/1ydf PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1ydf TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ydf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ydf OCA], [http://pdbe.org/1ydf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ydf RCSB], [http://www.ebi.ac.uk/pdbsum/1ydf PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ydf ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/1ydf TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 10: Line 11:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1ydf_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1ydf_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>

Revision as of 06:29, 25 April 2018

Crystal structure of a HAD-like phosphatase from Streptococcus pneumoniae

1ydf, resolution 2.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools