5ypk
From Proteopedia
(Difference between revisions)
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<StructureSection load='5ypk' size='340' side='right' caption='[[5ypk]], [[Resolution|resolution]] 2.00Å' scene=''> | <StructureSection load='5ypk' size='340' side='right' caption='[[5ypk]], [[Resolution|resolution]] 2.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[5ypk]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YPK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YPK FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5ypk]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YPK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5YPK FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HIW:(2R,4S)-2-[(1S,2R)-1-CARBOXY-2-HYDROXYPROPYL]-4-[(2-{[(Z)-IMINOMETHYL]AMINO}ETHYL)SULFANYL]-3,4-DIHYDRO-2H-PYRROLE-5-CARBOXYLIC+ACID'>HIW</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HIW:(2R,4S)-2-[(1S,2R)-1-CARBOXY-2-HYDROXYPROPYL]-4-[(2-{[(Z)-IMINOMETHYL]AMINO}ETHYL)SULFANYL]-3,4-DIHYDRO-2H-PYRROLE-5-CARBOXYLIC+ACID'>HIW</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">blaNDM-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ypk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ypk OCA], [http://pdbe.org/5ypk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ypk RCSB], [http://www.ebi.ac.uk/pdbsum/5ypk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ypk ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ypk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ypk OCA], [http://pdbe.org/5ypk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ypk RCSB], [http://www.ebi.ac.uk/pdbsum/5ypk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ypk ProSAT]</span></td></tr> | ||
</table> | </table> | ||
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</div> | </div> | ||
<div class="pdbe-citations 5ypk" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5ypk" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Beta-lactamase|Beta-lactamase]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Bacillus coli migula 1895]] | ||
[[Category: Feng, H]] | [[Category: Feng, H]] | ||
[[Category: Liu, W]] | [[Category: Liu, W]] |
Revision as of 05:55, 16 May 2018
Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EI2 complex
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Categories: Bacillus coli migula 1895 | Feng, H | Liu, W | Wang, D | Ei2 complex | Hydrolase | Imipenem | Ndm-1