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2dty
From Proteopedia
(Difference between revisions)
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==Crystal structure of basic winged bean lectin complexed with N-acetyl-D-galactosamine== | ==Crystal structure of basic winged bean lectin complexed with N-acetyl-D-galactosamine== | ||
<StructureSection load='2dty' size='340' side='right' caption='[[2dty]], [[Resolution|resolution]] 2.65Å' scene=''> | <StructureSection load='2dty' size='340' side='right' caption='[[2dty]], [[Resolution|resolution]] 2.65Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2dty]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Psophocarpus_tetragonolobus Psophocarpus tetragonolobus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DTY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DTY FirstGlance]. <br> | <table><tr><td colspan='2'>[[2dty]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Psophocarpus_tetragonolobus Psophocarpus tetragonolobus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DTY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DTY FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=A2G:N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE'>A2G</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand= | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=A2G:N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE'>A2G</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=FUL:BETA-L-FUCOSE'>FUL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1wbl|1wbl]], [[2d3s|2d3s]], [[1wbf|1wbf]], [[2dtw|2dtw]], [[2du0|2du0]], [[2du1|2du1]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1wbl|1wbl]], [[2d3s|2d3s]], [[1wbf|1wbf]], [[2dtw|2dtw]], [[2du0|2du0]], [[2du1|2du1]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dty FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dty OCA], [http://pdbe.org/2dty PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dty RCSB], [http://www.ebi.ac.uk/pdbsum/2dty PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dty FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dty OCA], [http://pdbe.org/2dty PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dty RCSB], [http://www.ebi.ac.uk/pdbsum/2dty PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dty ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/2dty_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/2dty_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</div> | </div> | ||
<div class="pdbe-citations 2dty" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 2dty" style="background-color:#fffaf0;"></div> | ||
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| + | ==See Also== | ||
| + | *[[Agglutinin|Agglutinin]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
Revision as of 06:36, 6 June 2018
Crystal structure of basic winged bean lectin complexed with N-acetyl-D-galactosamine
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