This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2j9n
From Proteopedia
| Line 4: | Line 4: | ||
|PDB= 2j9n |SIZE=350|CAPTION= <scene name='initialview01'>2j9n</scene>, resolution 1.50Å | |PDB= 2j9n |SIZE=350|CAPTION= <scene name='initialview01'>2j9n</scene>, resolution 1.50Å | ||
|SITE= <scene name='pdbsite=AC1:Na+Binding+Site+For+Chain+A'>AC1</scene> | |SITE= <scene name='pdbsite=AC1:Na+Binding+Site+For+Chain+A'>AC1</scene> | ||
| - | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand= | + | |LIGAND= <scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=IPH:PHENOL'>IPH</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=UNK:UNKNOWN'>UNK</scene> |
| - | |ACTIVITY= [http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] | + | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span> |
|GENE= | |GENE= | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY=[[1aq7|1AQ7]], [[1auj|1AUJ]], [[1az8|1AZ8]], [[1bju|1BJU]], [[1bjv|1BJV]], [[1btp|1BTP]], [[1btw|1BTW]], [[1btx|1BTX]], [[1bty|1BTY]], [[1btz|1BTZ]], [[1c1n|1C1N]], [[1c1o|1C1O]], [[1c1p|1C1P]], [[1c1q|1C1Q]], [[1c1r|1C1R]], [[1c1s|1C1S]], [[1c1t|1C1T]], [[1c2d|1C2D]], [[1c2e|1C2E]], [[1c2f|1C2F]], [[1c2g|1C2G]], [[1c2h|1C2H]], [[1c2i|1C2I]], [[1c2j|1C2J]], [[1c2k|1C2K]], [[1c2l|1C2L]], [[1c2m|1C2M]], [[1c5p|1C5P]], [[1c5q|1C5Q]], [[1c5r|1C5R]], [[1c5s|1C5S]], [[1c5t|1C5T]], [[1c5u|1C5U]], [[1c5v|1C5V]], [[1c9t|1C9T]], [[1ce5|1CE5]], [[1cu7|1CU7]], [[1cu8|1CU8]], [[1cu9|1CU9]], [[1d6r|1D6R]], [[1eb2|1EB2]], [[1ejm|1EJM]], [[1ezx|1EZX]], [[1f0t|1F0T]], [[1f0u|1F0U]], [[1f2s|1F2S]], [[1g36|1G36]], [[1g3b|1G3B]], [[1g3c|1G3C]], [[1g3d|1G3D]], [[1g3e|1G3E]], [[1g9i|1G9I]], [[1gbt|1GBT]], [[1ghz|1GHZ]], [[1gi0|1GI0]], [[1gi1|1GI1]], [[1gi2|1GI2]], [[1gi3|1GI3]], [[1gi4|1GI4]], [[1gi5|1GI5]], [[1gi6|1GI6]], [[1gj6|1GJ6]], [[1hj9|1HJ9]], [[1j8a|1J8A]], [[1jir|1JIR]], [[1jrs|1JRS]], [[1jrt|1JRT]], [[1k1i|1K1I]], [[1k1j|1K1J]], [[1k1l|1K1L]], [[1k1m|1K1M]], [[1k1n|1K1N]], [[1k1o|1K1O]], [[1k1p|1K1P]], [[1lqe|1LQE]], [[1max|1MAX]], [[1may|1MAY]], [[1mts|1MTS]], [[1mtu|1MTU]], [[1mtv|1MTV]], [[1mtw|1MTW]], [[1n6x|1N6X]], [[1n6y|1N6Y]], [[1nc6|1NC6]], [[1ntp|1NTP]], [[1o2h|1O2H]], [[1o2i|1O2I]], [[1o2j|1O2J]], [[1o2k|1O2K]], [[1o2l|1O2L]], [[1o2m|1O2M]], [[1o2n|1O2N]], [[1o2o|1O2O]], [[1o2p|1O2P]], [[1o2q|1O2Q]], [[1o2r|1O2R]], [[1o2s|1O2S]], [[1o2t|1O2T]], [[1o2u|1O2U]], [[1o2v|1O2V]], [[1o2w|1O2W]], [[1o2x|1O2X]], [[1o2y|1O2Y]], [[1o2z|1O2Z]], [[1o30|1O30]], [[1o31|1O31]], [[1o32|1O32]], [[1o33|1O33]], [[1o34|1O34]], [[1o35|1O35]], [[1o36|1O36]], [[1o37|1O37]], [[1o38|1O38]], [[1o39|1O39]], [[1o3a|1O3A]], [[1o3b|1O3B]], [[1o3c|1O3C]], [[1o3d|1O3D]], [[1o3e|1O3E]], [[1o3f|1O3F]], [[1o3g|1O3G]], [[1o3h|1O3H]], [[1o3i|1O3I]], [[1o3j|1O3J]], [[1o3k|1O3K]], [[1o3l|1O3L]], [[1o3m|1O3M]], [[1o3n|1O3N]], [[1o3o|1O3O]], [[1oph|1OPH]], [[1ox1|1OX1]], [[1oyq|1OYQ]], [[1p2i|1P2I]], [[1p2j|1P2J]], [[1p2k|1P2K]], [[1ppc|1PPC]], [[1ppe|1PPE]], [[1pph|1PPH]], [[1qa0|1QA0]], [[1qb1|1QB1]], [[1qb6|1QB6]], [[1qb9|1QB9]], [[1qbn|1QBN]], [[1qbo|1QBO]], [[1qcp|1QCP]], [[1ql7|1QL7]], [[1ql8|1QL8]], [[1rxp|1RXP]], [[1s0q|1S0Q]], [[1s0r|1S0R]], [[1sbw|1SBW]], [[1sfi|1SFI]], [[1smf|1SMF]], [[1tab|1TAB]], [[1taw|1TAW]], [[1tgb|1TGB]], [[1tgc|1TGC]], [[1tgn|1TGN]], [[1tgs|1TGS]], [[1tgt|1TGT]], [[1tio|1TIO]], [[1tld|1TLD]], [[1tng|1TNG]], [[1tnh|1TNH]], [[1tni|1TNI]], [[1tnj|1TNJ]], [[1tnk|1TNK]], [[1tnl|1TNL]], [[1tpa|1TPA]], [[1tpo|1TPO]], [[1tpp|1TPP]], [[1tps|1TPS]], [[1tx7|1TX7]], [[1tx8|1TX8]], [[1tyn|1TYN]], [[1utn|1UTN]], [[1uto|1UTO]], [[1utp|1UTP]], [[1utq|1UTQ]], [[1v2j|1V2J]], [[1v2k|1V2K]], [[1v2l|1V2L]], [[1v2m|1V2M]], [[1v2n|1V2N]], [[1v2o|1V2O]], [[1v2p|1V2P]], [[1v2q|1V2Q]], [[1v2r|1V2R]], [[1v2s|1V2S]], [[1v2t|1V2T]], [[1v2u|1V2U]], [[1v2v|1V2V]], [[1v2w|1V2W]], [[1xuf|1XUF]], [[1xug|1XUG]], [[1xuh|1XUH]], [[1xui|1XUI]], [[1xuj|1XUJ]], [[1xuk|1XUK]], [[1y3u|1Y3U]], [[1y3v|1Y3V]], [[1y3w|1Y3W]], [[1y3x|1Y3X]], [[1y3y|1Y3Y]], [[1y59|1Y59]], [[1y5a|1Y5A]], [[1y5b|1Y5B]], [[1y5u|1Y5U]], [[1yp9|1YP9]], [[1yyy|1YYY]], [[1zr0|1ZR0]], [[1zzz|1ZZZ]], [[2a7h|2A7H]], [[2ah4|2AH4]], [[2ayw|2AYW]], [[2blv|2BLV]], [[2blw|2BLW]], [[2btc|2BTC]], [[2by5|2BY5]], [[2by6|2BY6]], [[2by7|2BY7]], [[2by8|2BY8]], [[2by9|2BY9]], [[2bya|2BYA]], [[2bza|2BZA]], [[2cmy|2CMY]], [[2fi3|2FI3]], [[2fi4|2FI4]], [[2fi5|2FI5]], [[2ftl|2FTL]], [[2ftm|2FTM]], [[2fx4|2FX4]], [[2fx6|2FX6]], [[2ptc|2PTC]], [[2ptn|2PTN]], [[2tga|2TGA]], [[2tgd|2TGD]], [[2tgp|2TGP]], [[2tgt|2TGT]], [[2tio|2TIO]], [[2tld|2TLD]], [[2tpi|2TPI]], [[3btd|3BTD]], [[3bte|3BTE]], [[3btf|3BTF]], [[3btg|3BTG]], [[3bth|3BTH]], [[3btk|3BTK]], [[3btm|3BTM]], [[3btq|3BTQ]], [[3btt|3BTT]], [[3btw|3BTW]], [[3ptb|3PTB]], [[3ptn|3PTN]], [[3tpi|3TPI]], [[4tpi|4TPI]], [[5ptp|5PTP]] | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2j9n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j9n OCA], [http://www.ebi.ac.uk/pdbsum/2j9n PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2j9n RCSB]</span> | ||
}} | }} | ||
| Line 26: | Line 29: | ||
[[Category: Viola, R.]] | [[Category: Viola, R.]] | ||
[[Category: Walsh, J.]] | [[Category: Walsh, J.]] | ||
| - | [[Category: BEN]] | ||
| - | [[Category: CA]] | ||
| - | [[Category: IPH]] | ||
| - | [[Category: NA]] | ||
[[Category: benzamidine]] | [[Category: benzamidine]] | ||
[[Category: calcium]] | [[Category: calcium]] | ||
| Line 43: | Line 42: | ||
[[Category: zymogen]] | [[Category: zymogen]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:55:01 2008'' |
Revision as of 00:55, 31 March 2008
ROBOTICALLY HARVESTED TRYPSIN COMPLEXED WITH BENZAMIDINE CONTAINING POLYPEPTIDE MEDIATED CRYSTAL CONTACTS
About this Structure
2J9N is a Protein complex structure of sequences from Bos taurus. Full crystallographic information is available from OCA.
Page seeded by OCA on Mon Mar 31 03:55:01 2008
Categories: Bos taurus | Protein complex | Trypsin | Benning, M. | Carman, P. | Cudney, R. | Frankel, D. | McPherson, A. | Miller, E. | Rupp, B. | Viola, R. | Walsh, J. | Benzamidine | Calcium | Digestion | Hydrolase | Intermolecular contact | Metal-binding | Protease | Robotic harvest | Salmon protamine peptide | Serine protease | Zymogen
