Glutaminase-Asparaginase (Pseudomonas 7A)
From Proteopedia
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Pseudomonas 7A Glutaminase-Asparaginase (PGA) consists of a tetrameric structure. Each <scene name='79/790325/Monomer_3pga/1'>monomer</scene> is identical and possesses 337 residues. | Pseudomonas 7A Glutaminase-Asparaginase (PGA) consists of a tetrameric structure. Each <scene name='79/790325/Monomer_3pga/1'>monomer</scene> is identical and possesses 337 residues. | ||
In the amminoterminal portion of each monomer, is able to identify <scene name='79/790325/Beta_sheets_3pga/1'>10 beta-sheets</scene> and <scene name='79/790325/Alphahelix_3pga/1'>4 alpha-helix</scene>, unlike the carboxyl-terminal domain which have <scene name='79/790325/Beta_sheets_3pga/1'>4 beta sheets</scene> and <scene name='79/790325/Alphahelix_3pga/1'>4 alpha helix</scene>, you can also note that 5 beta-strands of the sheet are parallel and 4 are parallel. | In the amminoterminal portion of each monomer, is able to identify <scene name='79/790325/Beta_sheets_3pga/1'>10 beta-sheets</scene> and <scene name='79/790325/Alphahelix_3pga/1'>4 alpha-helix</scene>, unlike the carboxyl-terminal domain which have <scene name='79/790325/Beta_sheets_3pga/1'>4 beta sheets</scene> and <scene name='79/790325/Alphahelix_3pga/1'>4 alpha helix</scene>, you can also note that 5 beta-strands of the sheet are parallel and 4 are parallel. | ||
- | The PGA structure exhibit 4 active sites, they can be found in the intersection of monomers between the first and the third parallel beta sheets and loops from the carboxyl-terminal of the adjacent subunit, being the <scene name='79/790325/Flexible_loops_active_3pga/3'>residues 20-40</scene> the loop from carboxyl terminal and really important on catalysis due to their high flexibility. | + | The PGA structure exhibit 4 active sites, they can be found in the intersection of monomers between the first and the third parallel beta sheets and loops from the carboxyl-terminal of the adjacent subunit, being the <scene name='79/790325/Flexible_loops_active_3pga/3'>residues 20-40</scene> the loop from carboxyl terminal and really important on catalysis due to their high flexibility; the main residues of this loop are Thr20, tyr34 and gly40. |
+ | In adition to flexible loop, there's a rigid group that takes part on catalysis and is represented by residues <scene name='79/790325/Active_site_residues_3pga/1'>Thr100, Asp101 and Lys173</scene> | ||
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes. | This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes. |
Revision as of 07:25, 17 June 2018
</StructureSection>' size='350' frame='true' align='right' caption='Insert caption here' scene='Insert optional scene name here' />==Glutaminase-Asparaginase (Pseudomonas 7A)==
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644