2jsc
From Proteopedia
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|PDB= 2jsc |SIZE=350|CAPTION= <scene name='initialview01'>2jsc</scene> | |PDB= 2jsc |SIZE=350|CAPTION= <scene name='initialview01'>2jsc</scene> | ||
|SITE= | |SITE= | ||
| - | |LIGAND= <scene name='pdbligand=CD:CADMIUM ION'>CD</scene> | + | |LIGAND= <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene> |
|ACTIVITY= | |ACTIVITY= | ||
|GENE= Rv1994c, MT2050, MTCY39.25 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis]) | |GENE= Rv1994c, MT2050, MTCY39.25 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis]) | ||
| + | |DOMAIN= | ||
| + | |RELATEDENTRY= | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2jsc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jsc OCA], [http://www.ebi.ac.uk/pdbsum/2jsc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2jsc RCSB]</span> | ||
}} | }} | ||
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[[Category: Robinson, N J.]] | [[Category: Robinson, N J.]] | ||
[[Category: SPINE, Structural Proteomics in Europe.]] | [[Category: SPINE, Structural Proteomics in Europe.]] | ||
| - | [[Category: CD]] | ||
[[Category: cadmium]] | [[Category: cadmium]] | ||
[[Category: nmr]] | [[Category: nmr]] | ||
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[[Category: transcriptional repressor]] | [[Category: transcriptional repressor]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:01:19 2008'' |
Revision as of 01:01, 31 March 2008
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| Ligands: | |||||||
| Gene: | Rv1994c, MT2050, MTCY39.25 (Mycobacterium tuberculosis) | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
NMR structure of the cadmium metal-sensor CMTR from Mycobacterium tuberculosis
Overview
CmtR from Mycobacterium tuberculosis is a winged helical DNA-binding repressor of the ArsR-SmtB metal-sensing family that senses cadmium and lead. Cadmium-CmtR is a dimer with the metal bound to Cys-102 from the C-terminal region of one subunit and two Cys associated with helix alphaR from the other subunit, forming a symmetrical pair of cadmium-binding sites. This is a significant novelty in the ArsR-SmtB family. The structure of the dimer could be solved at 312 K. The apoprotein at the same temperature is still a dimer, but it experiences a large conformational exchange at the dimer interface and within each monomer. This is monitored by an overall decrease of the number of nuclear Overhauser effects and by an increase of H(2)O-D(2)O exchange rates, especially at the dimeric interface, in the apo form with respect to the cadmium-bound state. The C-terminal tail region is completely unstructured in both apo and cadmium forms but becomes less mobile in the cadmium-bound protein due to the recruitment of Cys-102 as a metal-ligand. DNA binds to the apo dimer with a ratio 1:3 at millimolar concentration. Addition of cadmium to the apo-CmtR-DNA complex causes DNA detachment, restoring the NMR spectrum of free cadmium-CmtR. Cadmium binding across the dimer interface impairs DNA association by excluding the apo-conformers suited to bind DNA.
About this Structure
2JSC is a Single protein structure of sequence from Mycobacterium tuberculosis. Full crystallographic information is available from OCA.
Reference
NMR structural analysis of cadmium sensing by winged helix repressor CmtR., Banci L, Bertini I, Cantini F, Ciofi-Baffoni S, Cavet JS, Dennison C, Graham AI, Harvie DR, Robinson NJ, J Biol Chem. 2007 Oct 12;282(41):30181-8. Epub 2007 Jun 27. PMID:17599915
Page seeded by OCA on Mon Mar 31 04:01:19 2008
Categories: Mycobacterium tuberculosis | Single protein | Banci, L. | Bertini, I. | Cantini, F. | Cavet, J S. | Ciofi-Baffoni, S. | Dennison, C. | Graham, A I. | Harvie, D R. | Robinson, N J. | SPINE, Structural Proteomics in Europe. | Cadmium | Nmr | Solution structure | Spine | Structural genomic | Structural proteomics in europe | Transcriptional repressor
